RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 KIFC2Q96AC6 838 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 SH2D4AQ9H788 454 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 VCPKMTQ9H867 229 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 MKNK2Q9HBH9 465 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 PRDM6Q9NQX0 595 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 POLIQ9UNA4 740 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 DCDC2CA8MYV0 355 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 EML1O00423 815 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 CLTBP09497 229 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 ACRP10323 421 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 MCM4P33991 863 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 MAPK8P45983 427 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 SMTNP53814 917 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 CHMP4BP1P59074 171 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 GRIN2CQ14957 1233 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 SNRNP48Q6IEG0 339 aaKnown RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 MB21D1Q8N884 522 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 ZNF512BQ96KM6 892 aaPredicted RBP5.68□□□□□ -1.5
LINC00550-201ENST00000629293 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 MROH8Q9H579 483 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 PAG1Q9NWQ8 432 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 CHD7Q9P2D1 2997 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 CDK5RAP2Q96SN8 1893 aa5.68□□□□□ -1.5
LINC00550-201ENST00000629293 SALL3Q9BXA9 1300 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 A6NJY4 79 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 FPGSQ05932 587 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 GABPAQ06546 454 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 TSHZ3Q63HK5 1081 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 DDX49Q9Y6V7 483 aaKnown RBP5.67□□□□□ -1.5
LINC00550-201ENST00000629293 LOC285556D6RIA3 1793 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 A0A1W2PQ45 241 aaPredicted RBP5.67□□□□□ -1.5
LINC00550-201ENST00000629293 A0A1W2PQY0 241 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 SIAH2O43255 324 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 EIF5BO60841 1220 aaKnown RBP5.67□□□□□ -1.5
LINC00550-201ENST00000629293 ZNF394Q53GI3 561 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 HSP90AB4PQ58FF6 505 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 OLFML2BQ68BL8 750 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 EEPD1Q7L9B9 569 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 ANKRD35Q8N283 1001 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 USP38Q8NB14 1042 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 OTUD7AQ8TE49 926 aaPredicted RBP5.67□□□□□ -1.5
LINC00550-201ENST00000629293 RNF34Q969K3 372 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC00550-201ENST00000629293 PRDM12Q9H4Q4 367 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 TMX2Q9Y320 296 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 MYH1P12882 1939 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 WDR46O15213 610 aaKnown RBP5.67□□□□□ -1.5
LINC00550-201ENST00000629293 HMMRO75330 724 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 CD2BP2O95400 341 aaKnown RBP5.67□□□□□ -1.5
LINC00550-201ENST00000629293 PDGFAP04085 211 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 AKR1A1P14550 325 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 GNASQ5JWF2 1037 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 KIF1BPQ96EK5 621 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 GLT1D1Q96MS3 346 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 RAVER2Q9HCJ3 691 aaKnown RBP5.67□□□□□ -1.5
LINC00550-201ENST00000629293 CLIP2Q9UDT6 1046 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 SWAP70Q9UH65 585 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 RAPGEFL1Q9UHV5 662 aa5.67□□□□□ -1.5
LINC00550-201ENST00000629293 PLXNB2O15031 1838 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 MYADML2A6NDP7 307 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 VWA5AO00534 786 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 BACH1O14867 736 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 PTGS1P23219 599 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 VARSP26640 1264 aaKnown RBP5.66□□□□□ -1.5
LINC00550-201ENST00000629293 RAB15P59190 212 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 BEX3Q00994 111 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 KCNA10Q16322 511 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 SIAH1Q8IUQ4 282 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 LRRC47Q8N1G4 583 aaKnown RBP5.66□□□□□ -1.5
LINC00550-201ENST00000629293 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
LINC00550-201ENST00000629293 NIF3L1Q9GZT8 377 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 ZNF576Q9H609 170 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 KANSL2Q9H9L4 492 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 SPC25Q9HBM1 224 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 CYLDQ9NQC7 956 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 SIPA1L1O43166 1804 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 XIRP2A4UGR9 3374 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 PNMA6FA0A0J9YX94 578 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 SLC25A27O95847 323 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 CSF2RAP15509 400 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 GNA15P30679 374 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 TDO2P48775 406 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 ACLYP53396 1101 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 AGERQ15109 404 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 OTOP2Q7RTS6 562 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 SHCBP1Q8NEM2 672 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 NUP133Q8WUM0 1156 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 TIFAQ96CG3 184 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 CCDC17Q96LX7 622 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 GAS2L1Q99501 681 aaPredicted RBP5.66□□□□□ -1.5
LINC00550-201ENST00000629293 PUS7LQ9H0K6 701 aaKnown RBP5.66□□□□□ -1.5
LINC00550-201ENST00000629293 PPP1R9AQ9ULJ8 1098 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 RIPK3Q9Y572 518 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 CHD9Q3L8U1 2897 aa5.66□□□□□ -1.5
LINC00550-201ENST00000629293 FSD2A1L4K1 749 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 K7ELQ4 463 aaPredicted RBP5.65□□□□□ -1.5
LINC00550-201ENST00000629293 SDSP20132 328 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 ADD2P35612 726 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 CCL23P55773 120 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms