RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ADGBQ8N7X0 1667 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 PI4K2BQ8TCG2 481 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 MED4Q9NPJ6 270 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
SCN8A-209ENST00000627620 RCOR1Q9UKL0 485 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 A0A087WWV3 80 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 CD2BP2O95400 341 aaKnown RBP13.92□□□□□ -0.18
SCN8A-209ENST00000627620 UBE2SQ16763 222 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 Q3C1V9 767 aa13.92□□□□□ -0.18
SCN8A-209ENST00000627620 RSRC2Q7L4I2 434 aaKnown RBP13.92□□□□□ -0.18
SCN8A-209ENST00000627620 TACO1Q9BSH4 297 aaKnown RBP13.92□□□□□ -0.18
SCN8A-209ENST00000627620 CLASP1Q7Z460 1538 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 USP17L3A6NCW0 530 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 USP17L4A6NCW7 530 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 TTC36A6NLP5 189 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 ECE1P42892 770 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 USP17L1Q7RTZ2 530 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 BCAS4Q8TDM0 211 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 LRRC8CQ8TDW0 803 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 SNX25Q9H3E2 840 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 RIPOR2Q9Y4F9 1068 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 CAPN7Q9Y6W3 813 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 TFAMQ00059 246 aaKnown RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 APBA1Q02410 837 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 RASGRF1Q13972 1273 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 EMILIN3Q9NT22 766 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 GOLGA8SH3BPF8 625 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 WDR46O15213 610 aaKnown RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 INHBAP08476 426 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 PDE1BQ01064 536 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 EXOC8Q8IYI6 725 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 FAM133AQ8N9E0 248 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 PIGBQ92521 554 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 RWDD2AQ9UIY3 292 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 ROBO2Q9HCK4 1378 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 ZNF853P0CG23 659 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 CUL4AQ13619 759 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 MIGA2Q7L4E1 593 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 CACTINQ8WUQ7 758 aaKnown RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 SKA2Q8WVK7 121 aaPredicted RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 RABGGTAQ92696 567 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 IFT122Q9HBG6 1241 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 FAM114A2Q9NRY5 505 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 EIF3CLB5ME19 914 aaKnown RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 CDC37Q16543 378 aaPredicted RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 PHLDB3Q6NSJ2 640 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 EIF3CQ99613 913 aaKnown RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 TRIM56Q9BRZ2 755 aaKnown RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 GCNT4Q9P109 453 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 SRP68Q9UHB9 627 aaKnown RBP13.91□□□□□ -0.18
SCN8A-209ENST00000627620 PCDHB6Q9Y5E3 794 aa13.91□□□□□ -0.18
SCN8A-209ENST00000627620 GFPT2O94808 682 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 MTERF2Q49AM1 385 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 FAM81BQ96LP2 452 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 PDE11AQ9HCR9 933 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 SRPRBQ9Y5M8 271 aaKnown RBP13.9□□□□□ -0.18
SCN8A-209ENST00000627620 ARHGEF5Q12774 1597 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 GRAPQ13588 217 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 KCTD16Q68DU8 428 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.9□□□□□ -0.18
SCN8A-209ENST00000627620 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
SCN8A-209ENST00000627620 UBE2TQ9NPD8 197 aaPredicted RBP13.9□□□□□ -0.18
SCN8A-209ENST00000627620 GOLGA8CPA6NN73 597 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 SASH1O94885 1247 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 PLA2G4BP0C869 781 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 PLCG1P19174 1290 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 SNX1Q13596 522 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 MUM1Q2TAK8 710 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 EEPD1Q7L9B9 569 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 METTL23Q86XA0 190 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 HDAC11Q96DB2 347 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 PARVGQ9HBI0 331 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.18
SCN8A-209ENST00000627620 ANAPC5Q9UJX4 755 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 DAAM1Q9Y4D1 1078 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 KRT27Q7Z3Y8 459 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 ZBTB33Q86T24 672 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.18
SCN8A-209ENST00000627620 CDK8P49336 464 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 IRX4P78413 519 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 SGO2Q562F6 1265 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 CCDC93Q567U6 631 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 NLRP7Q8WX94 980 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 SMYD2Q9NRG4 433 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
SCN8A-209ENST00000627620 NXF1Q9UBU9 619 aaKnown RBP13.89□□□□□ -0.19
SCN8A-209ENST00000627620 LIFRP42702 1097 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 BBS5Q8N3I7 341 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 BAG2O95816 211 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 CCNE1P24864 410 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 JADE1Q6IE81 842 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 ANKARQ7Z5J8 1434 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 PNMA6FA0A0J9YX94 578 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 KIF3CO14782 793 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 SPATS2Q86XZ4 545 aaKnown RBP13.89□□□□□ -0.19
SCN8A-209ENST00000627620 CCNYQ8ND76 341 aa13.89□□□□□ -0.19
SCN8A-209ENST00000627620 TTLL11Q8NHH1 800 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms