RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SLC15A5A6NIM6 579 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 MSCO60682 206 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 COL6A1P12109 1028 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 SYKP43405 635 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 MAP2K5Q13163 448 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 LETM2Q2VYF4 491 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 Q3C1V9 767 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 LONRF3Q496Y0 759 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 L1TD1Q5T7N2 865 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 ARL6IP4Q66PJ3 421 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 APBA2Q99767 749 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 UBE2OQ9C0C9 1292 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 TSPY26PQ9H489 355 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 TXNRD2Q9NNW7 524 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 ALPK3Q96L96 1907 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 LCTP09848 1927 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 A0A087WWV3 80 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 VWA3AA6NCI4 1184 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 CTAGE5O15320 804 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 SLC37A4O43826 429 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 TDP2O95551 362 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 MAGEA10P43363 369 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 MRE11P49959 708 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 LHX8Q68G74 356 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 CCDC174Q6PII3 467 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 LBX2Q6XYB7 198 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 CATSPERGQ6ZRH7 1159 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 TBC1D5Q92609 795 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 TIGD1Q96MW7 591 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
PDLIM5-223ENST00000627587 PIK3CDO00329 1044 aa10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 ACTN4O43707 911 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 CCNT1O60563 726 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 TYRO3Q06418 890 aa10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 DEFB123Q8N688 67 aa10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 PRPF38AQ8NAV1 312 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 MTMR9Q96QG7 549 aa10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 SLF1Q9BQI6 1058 aa10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 RPAP3Q9H6T3 665 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 FAM13BQ9NYF5 915 aa10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 STXBP5LQ9Y2K9 1186 aa10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 IVNS1ABPQ9Y6Y0 642 aa10.75□□□□□ -0.69
PDLIM5-223ENST00000627587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 POLR2DO15514 142 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 ICAM1P05362 532 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 HOXC6P09630 235 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 CDC25AP30304 524 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 PRPHP41219 470 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 PPP4R3AQ6IN85 833 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 KRBA2Q6ZNG9 492 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 ANO3Q9BYT9 981 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 PORCNQ9H237 461 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 SLC38A10Q9HBR0 1119 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 PPP1R9AQ9ULJ8 1098 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 PFASO15067 1338 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 PP2D1A8MPX8 630 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 LAD1O00515 517 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 STRNO43815 780 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 NEMFO60524 1076 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 SYN1P17600 705 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 HOXA13P31271 388 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 ORC2Q13416 577 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 E2F4Q16254 413 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 MCTP2Q6DN12 878 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 RNF214Q8ND24 703 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 REPS2Q8NFH8 660 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 LRRC15Q8TF66 581 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 CLEC4DQ8WXI8 215 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 MBOAT7Q96N66 472 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 SDF4Q9BRK5 362 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 TANGO6Q9C0B7 1094 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 HOXC10Q9NYD6 342 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 ADAMTS5Q9UNA0 930 aa10.74□□□□□ -0.69
PDLIM5-223ENST00000627587 FLOT1O75955 427 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 OR52Z1P0C646 297 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 CCDC192P0DO97 292 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 CCND3P30281 292 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 AP3B2Q13367 1082 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 FAM109BQ6ICB4 259 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 TEX2Q8IWB9 1127 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 PDILTQ8N807 584 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 HAS1Q92839 578 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 ATG4CQ96DT6 458 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 LBHD1Q9BQE6 289 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 SLC5A4Q9NY91 659 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 KIAA1468Q9P260 1216 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 SERTAD1Q9UHV2 236 aa10.73□□□□□ -0.69
PDLIM5-223ENST00000627587 CYP3A7-CYP3A51PA0A087WV96 503 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 VWA5AO00534 786 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 NFIBO00712 420 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 CNMDO75829 334 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 CYP3A7P24462 503 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 LONP1P36776 959 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 SREBF1P36956 1147 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 GHRHRQ02643 423 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms