RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PSEN2P49810 448 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 NDUFV1P49821 464 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 RRP1P56182 461 aaKnown RBP16.46■□□□□ 0.23
SNX1-214ENST00000625244 HIC1Q14526 733 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 LY6KQ17RY6 165 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 CHST3Q7LGC8 479 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 HAUS7Q99871 368 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 OSBPL7Q9BZF2 842 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 RANBP17Q9H2T7 1088 aaKnown RBP16.46■□□□□ 0.23
SNX1-214ENST00000625244 EPB41L4AQ9HCS5 686 aaPredicted RBP16.46■□□□□ 0.23
SNX1-214ENST00000625244 INCENPQ9NQS7 918 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 NLRC5Q86WI3 1866 aa16.46■□□□□ 0.22
SNX1-214ENST00000625244 MED19A0JLT2 244 aaPredicted RBP16.45■□□□□ 0.22
SNX1-214ENST00000625244 RSPH10B2B2RC85 870 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 RB1P06400 928 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 RSPH10BP0C881 870 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 ATP5JP18859 108 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 THPOP40225 353 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
SNX1-214ENST00000625244 TFAP4Q01664 338 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 RNF207Q6ZRF8 634 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 SMRP1Q8NCR6 262 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 C11orf84Q9BUA3 381 aaPredicted RBP16.45■□□□□ 0.22
SNX1-214ENST00000625244 IFIH1Q9BYX4 1025 aaKnown RBP16.45■□□□□ 0.22
SNX1-214ENST00000625244 ZNF287Q9HBT7 754 aa16.45■□□□□ 0.22
SNX1-214ENST00000625244 GH1P01241 217 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 SLC16A2P36021 539 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 BMPR1AP36894 532 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 NUBP1P53384 320 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 CAMK1Q14012 370 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 MFSD10Q14728 455 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 ZKSCAN2Q63HK3 967 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 TTBK2Q6IQ55 1244 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 ADSSL1Q8N142 457 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 FIBCD1Q8N539 461 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 RPGRIP1Q96KN7 1286 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 MPHOSPH6Q99547 160 aaKnown RBP16.44■□□□□ 0.22
SNX1-214ENST00000625244 MTMR7Q9Y216 660 aa16.44■□□□□ 0.22
SNX1-214ENST00000625244 CCER2I3L3R5 266 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 HAS3O00219 553 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 ZNF286BP0CG31 522 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 TDO2P48775 406 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 COASYQ13057 564 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 DGKDQ16760 1214 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 HSP90AB4PQ58FF6 505 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 ZSCAN25Q6NSZ9 544 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 SEPT14Q6ZU15 432 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 DNERQ8NFT8 737 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 SEPT8Q92599 483 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 IL17RAQ96F46 866 aa16.43■□□□□ 0.22
SNX1-214ENST00000625244 USP15Q9Y4E8 981 aaPredicted RBP16.43■□□□□ 0.22
SNX1-214ENST00000625244 RALGAPA2Q2PPJ7 1873 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 F2P00734 622 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 MMP1P03956 469 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 ICAM3P32942 547 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 FRMD5Q7Z6J6 570 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 ADGRD2Q7Z7M1 963 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 SERINC5Q86VE9 423 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 OSBP2Q969R2 916 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 KIF1BPQ96EK5 621 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 RIPOR3Q96MK2 946 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 KATNAL1Q9BW62 490 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 PHF7Q9BWX1 381 aaPredicted RBP16.42■□□□□ 0.22
SNX1-214ENST00000625244 STX8Q9UNK0 236 aa16.42■□□□□ 0.22
SNX1-214ENST00000625244 ACACBO00763 2458 aa16.41■□□□□ 0.22
SNX1-214ENST00000625244 NMT2O60551 498 aa16.41■□□□□ 0.22
SNX1-214ENST00000625244 PTPN21Q16825 1174 aa16.41■□□□□ 0.22
SNX1-214ENST00000625244 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
SNX1-214ENST00000625244 SYDE2Q5VT97 1194 aa16.41■□□□□ 0.22
SNX1-214ENST00000625244 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
SNX1-214ENST00000625244 NKD2Q969F2 451 aaPredicted RBP16.41■□□□□ 0.22
SNX1-214ENST00000625244 IL17RBQ9NRM6 502 aa16.41■□□□□ 0.22
SNX1-214ENST00000625244 BARX2Q9UMQ3 279 aaPredicted RBP16.41■□□□□ 0.22
SNX1-214ENST00000625244 RLBP1P12271 317 aa16.4■□□□□ 0.22
SNX1-214ENST00000625244 DNAJB1P25685 340 aa16.4■□□□□ 0.22
SNX1-214ENST00000625244 BTNL9Q6UXG8 535 aa16.4■□□□□ 0.22
SNX1-214ENST00000625244 EFHBQ8N7U6 833 aa16.4■□□□□ 0.22
SNX1-214ENST00000625244 TMEM105Q8N8V8 129 aa16.4■□□□□ 0.22
SNX1-214ENST00000625244 CLP1Q92989 425 aaKnown RBP16.4■□□□□ 0.22
SNX1-214ENST00000625244 CHD6Q8TD26 2715 aa16.4■□□□□ 0.22
SNX1-214ENST00000625244 MYH7P12883 1935 aa16.4■□□□□ 0.22
SNX1-214ENST00000625244 B4DLN1 442 aa16.39■□□□□ 0.21
SNX1-214ENST00000625244 GLP2RO95838 553 aa16.39■□□□□ 0.21
SNX1-214ENST00000625244 APPP05067 770 aa16.39■□□□□ 0.21
SNX1-214ENST00000625244 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
SNX1-214ENST00000625244 EMID1Q96A84 441 aaPredicted RBP16.39■□□□□ 0.21
SNX1-214ENST00000625244 RC3H2Q9HBD1 1191 aaKnown RBP16.39■□□□□ 0.21
SNX1-214ENST00000625244 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
SNX1-214ENST00000625244 RWDD3Q9Y3V2 267 aa16.39■□□□□ 0.21
SNX1-214ENST00000625244 GPAA1O43292 621 aa16.38■□□□□ 0.21
SNX1-214ENST00000625244 CTSHP09668 335 aa16.38■□□□□ 0.21
SNX1-214ENST00000625244 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
SNX1-214ENST00000625244 DCAF4Q8WV16 495 aa16.38■□□□□ 0.21
SNX1-214ENST00000625244 RMDN1Q96DB5 314 aa16.38■□□□□ 0.21
SNX1-214ENST00000625244 DDX41Q9UJV9 622 aaKnown RBP16.38■□□□□ 0.21
SNX1-214ENST00000625244 CEP250Q9BV73 2442 aa16.38■□□□□ 0.21
SNX1-214ENST00000625244 ADGRA3Q8IWK6 1321 aa16.38■□□□□ 0.21
SNX1-214ENST00000625244 NRIP1P48552 1158 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms