RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 FARP2O94887 1054 aaPredicted RBP4.77□□□□□ -1.65
CDKL5-208ENST00000624953 ATP2B1P20020 1258 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 HOXC12P31275 282 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 SCRN1Q12765 414 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 CCDC103Q8IW40 242 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 BTN2A2Q8WVV5 523 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 SREK1Q8WXA9 508 aaKnown RBP4.77□□□□□ -1.65
CDKL5-208ENST00000624953 GCM1Q9NP62 436 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 ARHGEF4Q9NR80 690 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 SIRPGQ9P1W8 387 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 KLHL14Q9P2G3 628 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 IMPACTQ9P2X3 320 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 RGS12O14924 1447 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 ARHGAP31Q2M1Z3 1444 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 MTUS2Q5JR59 1369 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 DUOX2Q9NRD8 1548 aa4.77□□□□□ -1.65
CDKL5-208ENST00000624953 CDK12Q9NYV4 1490 aaPredicted RBP4.76□□□□□ -1.65
CDKL5-208ENST00000624953 TRBV23OR9-2A0A075B6M9 112 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 LRRC10BA6NIK2 292 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 STK10O94804 968 aaKnown RBP4.76□□□□□ -1.65
CDKL5-208ENST00000624953 KCNH1O95259 989 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 ZFYVE9O95405 1425 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 TSPAN15O95858 294 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 THBDP07204 575 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 GLI4P10075 376 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 FGFR1P11362 822 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 GLDCP23378 1020 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 MAP4K2Q12851 820 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 SF3A1Q15459 793 aaKnown RBP4.76□□□□□ -1.65
CDKL5-208ENST00000624953 E4F1Q66K89 784 aaPredicted RBP4.76□□□□□ -1.65
CDKL5-208ENST00000624953 ADAT2Q7Z6V5 191 aaKnown RBP4.76□□□□□ -1.65
CDKL5-208ENST00000624953 CKAP2LQ8IYA6 745 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 DPF3Q92784 378 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 SYTL4Q96C24 671 aaPredicted RBP4.76□□□□□ -1.65
CDKL5-208ENST00000624953 CCDC140Q96MF4 163 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 HIRIP3Q9BW71 556 aaPredicted RBP4.76□□□□□ -1.65
CDKL5-208ENST00000624953 MCOLN1Q9GZU1 580 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 CDIP1Q9H305 208 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 GPR160Q9UJ42 338 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 LMTK2Q8IWU2 1503 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 TMEM2Q9UHN6 1383 aa4.76□□□□□ -1.65
CDKL5-208ENST00000624953 IRS2Q9Y4H2 1338 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 UNC13BO14795 1591 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 TEX51A0A1B0GUA7 166 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 NOP56O00567 594 aaKnown RBP4.75□□□□□ -1.65
CDKL5-208ENST00000624953 L1CAMP32004 1257 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 GRIA2P42262 883 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 PPP2R2AP63151 447 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 RBM10P98175 930 aaKnown RBP4.75□□□□□ -1.65
CDKL5-208ENST00000624953 SF1Q15637 639 aaKnown RBP4.75□□□□□ -1.65
CDKL5-208ENST00000624953 MLANAQ16655 118 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 FBXO15Q8NCQ5 510 aaPredicted RBP4.75□□□□□ -1.65
CDKL5-208ENST00000624953 OSBP2Q969R2 916 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 FAM84AQ96KN4 292 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 CD320Q9NPF0 282 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 PDLIM7Q9NR12 457 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 TMEFF2Q9UIK5 374 aaPredicted RBP4.75□□□□□ -1.65
CDKL5-208ENST00000624953 TAF6LQ9Y6J9 622 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 JCADQ9P266 1359 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 LRP5O75197 1615 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 PTPN23Q9H3S7 1636 aa4.75□□□□□ -1.65
CDKL5-208ENST00000624953 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.75□□□□□ -1.65
CDKL5-208ENST00000624953 NOS1P29475 1434 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 FGD6Q6ZV73 1430 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 RGPD8O14715 1765 aaPredicted RBP4.74□□□□□ -1.65
CDKL5-208ENST00000624953 ASXL1Q8IXJ9 1541 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 C7orf72A4D263 438 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 IRS4O14654 1257 aaPredicted RBP4.74□□□□□ -1.65
CDKL5-208ENST00000624953 DLX3O60479 287 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 SEMA7AO75326 666 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 TBC1D8O95759 1140 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 DBHP09172 617 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 PLS3P13797 630 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 PRKCAP17252 672 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 GALK1P51570 392 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 SLC14A2Q15849 920 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 INF2Q27J81 1249 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 DPY19L1Q2PZI1 675 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 SPATC1Q76KD6 591 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 NLRP10Q86W26 655 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 C1QL4Q86Z23 238 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 KSR1Q8IVT5 923 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 TMEM145Q8NBT3 493 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 PLEKHO2Q8TD55 490 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 SLC26A8Q96RN1 970 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 EPB41L4BQ9H329 900 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 NSUN3Q9H649 340 aaKnown RBP4.74□□□□□ -1.65
CDKL5-208ENST00000624953 ST7Q9NRC1 585 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 MBD1Q9UIS9 605 aaPredicted RBP4.74□□□□□ -1.65
CDKL5-208ENST00000624953 SUGT1Q9Y2Z0 365 aa4.74□□□□□ -1.65
CDKL5-208ENST00000624953 COL22A1Q8NFW1 1626 aaPredicted RBP4.74□□□□□ -1.65
CDKL5-208ENST00000624953 ABCA3Q99758 1704 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 FAM221BA6H8Z2 402 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 PDPK1O15530 556 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 CPP00450 1065 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 CYBBP04839 570 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 PAMP19021 973 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 IGFBP6P24592 240 aaPredicted RBP4.73□□□□□ -1.65
CDKL5-208ENST00000624953 SEPHS1P49903 392 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 KCNAB2Q13303 367 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms