RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 TLR9Q9NR96 1032 aa8.58□□□□□ -1.04
LINC00963-218ENST00000624138 ISY1Q9ULR0 285 aaKnown RBP8.58□□□□□ -1.04
LINC00963-218ENST00000624138 TRPC6Q9Y210 931 aa8.58□□□□□ -1.04
LINC00963-218ENST00000624138 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
LINC00963-218ENST00000624138 ZNF292O60281 2723 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 GVINP1Q7Z2Y8 2422 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 RSPH10B2B2RC85 870 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 B4DLN1 442 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 UPP2O95045 317 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 RSPH10BP0C881 870 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 CALML3P27482 149 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 BMPR1AP36894 532 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 NOVP48745 357 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 MRPL12P52815 198 aaKnown RBP8.57□□□□□ -1.04
LINC00963-218ENST00000624138 RRP1P56182 461 aaKnown RBP8.57□□□□□ -1.04
LINC00963-218ENST00000624138 RPS6P62753 249 aaKnown RBP8.57□□□□□ -1.04
LINC00963-218ENST00000624138 ZNF200P98182 395 aaPredicted RBP8.57□□□□□ -1.04
LINC00963-218ENST00000624138 COASYQ13057 564 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 HIC1Q14526 733 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 DGKDQ16760 1214 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 LY6KQ17RY6 165 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 PPP4R3BQ5MIZ7 849 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 SMRP1Q8NCR6 262 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 CLP1Q92989 425 aaKnown RBP8.57□□□□□ -1.04
LINC00963-218ENST00000624138 CHMP4CQ96CF2 233 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 KATNAL1Q9BW62 490 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 CLEC1BQ9P126 229 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 RWDD3Q9Y3V2 267 aa8.57□□□□□ -1.04
LINC00963-218ENST00000624138 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
LINC00963-218ENST00000624138 PATL2C9JE40 543 aaKnown RBP8.56□□□□□ -1.04
LINC00963-218ENST00000624138 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
LINC00963-218ENST00000624138 F2P00734 622 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 MMP1P03956 469 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 RLBP1P12271 317 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 GNAT2P19087 354 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 ICAM3P32942 547 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 CAMK1Q14012 370 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 MFSD10Q14728 455 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 KIAA0753Q2KHM9 967 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 TTBK2Q6IQ55 1244 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 RASGRP2Q7LDG7 609 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 SERINC5Q86VE9 423 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 IFNL3Q8IZI9 196 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 FIBCD1Q8N539 461 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 DCAF4Q8WV16 495 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 SEPT8Q92599 483 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 OSBP2Q969R2 916 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
LINC00963-218ENST00000624138 IL17RAQ96F46 866 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 ALG1Q9BT22 464 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 C11orf84Q9BUA3 381 aaPredicted RBP8.56□□□□□ -1.04
LINC00963-218ENST00000624138 IGFLR1Q9H665 355 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 IL17RBQ9NRM6 502 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 PNMA2Q9UL42 364 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 DNAH14Q0VDD8 3507 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 DMXL1Q9Y485 3027 aa8.56□□□□□ -1.04
LINC00963-218ENST00000624138 GPAA1O43292 621 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 RAB11FIP3O75154 756 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
LINC00963-218ENST00000624138 CTNNB1P35222 781 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 SLC16A2P36021 539 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 THPOP40225 353 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 TDO2P48775 406 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 NDUFV1P49821 464 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 SYDE2Q5VT97 1194 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 ITPRIPQ8IWB1 547 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 EFHBQ8N7U6 833 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 APPBP2Q92624 585 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 RIPOR3Q96MK2 946 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 PHF7Q9BWX1 381 aaPredicted RBP8.55□□□□□ -1.04
LINC00963-218ENST00000624138 IFIH1Q9BYX4 1025 aaKnown RBP8.55□□□□□ -1.04
LINC00963-218ENST00000624138 OSBPL7Q9BZF2 842 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 MAF1Q9H063 256 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 RC3H2Q9HBD1 1191 aaKnown RBP8.55□□□□□ -1.04
LINC00963-218ENST00000624138 DDX41Q9UJV9 622 aaKnown RBP8.55□□□□□ -1.04
LINC00963-218ENST00000624138 WDR87Q6ZQQ6 2873 aa8.55□□□□□ -1.04
LINC00963-218ENST00000624138 WDR19Q8NEZ3 1342 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 PPFIA4O75335 1185 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 ATF7P17544 494 aaPredicted RBP8.54□□□□□ -1.04
LINC00963-218ENST00000624138 HOXC8P31273 242 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 LAMC2Q13753 1193 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 PTPN21Q16825 1174 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 SEPT14Q6ZU15 432 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 CHST3Q7LGC8 479 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 FTSJ3Q8IY81 847 aaKnown RBP8.54□□□□□ -1.04
LINC00963-218ENST00000624138 PPTC7Q8NI37 304 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 APBB2Q92870 758 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 P2RX5Q93086 422 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 ZNF689Q96CS4 500 aaPredicted RBP8.54□□□□□ -1.04
LINC00963-218ENST00000624138 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 INCENPQ9NQS7 918 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 STX8Q9UNK0 236 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 PLAGL2Q9UPG8 496 aa8.54□□□□□ -1.04
LINC00963-218ENST00000624138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.54□□□□□ -1.042e-8■■■■■ 48.5
LINC00963-218ENST00000624138 EP300Q09472 2414 aaPredicted RBP8.53□□□□□ -1.04
LINC00963-218ENST00000624138 EVPLQ92817 2033 aa8.53□□□□□ -1.04
LINC00963-218ENST00000624138 TPRP12270 2363 aaKnown RBP8.53□□□□□ -1.04
LINC00963-218ENST00000624138 RNF113AO15541 343 aaKnown RBP8.53□□□□□ -1.04
LINC00963-218ENST00000624138 NMT2O60551 498 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms