RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 PLA2G5P39877 138 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 TRIM71Q2Q1W2 868 aaKnown RBP12.77□□□□□ -0.37
LINC00963-214ENST00000622680 TRAF7Q6Q0C0 670 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 TICAM2Q86XR7 235 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 MCF2L2Q86YR7 1114 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 PLEKHM2Q8IWE5 1019 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.372e-13■■■■■ 28.4
LINC00963-214ENST00000622680 EMID1Q96A84 441 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-214ENST00000622680 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-214ENST00000622680 IL25Q9H293 177 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 DIAPH3Q9NSV4 1193 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 ZSWIM5Q9P217 1185 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 MRPL11Q9Y3B7 192 aaKnown RBP12.77□□□□□ -0.37
LINC00963-214ENST00000622680 COL4A6Q14031 1691 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 LINC01553A4QN01 128 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 HAS3O00219 553 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 GJB5O95377 273 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 HOXA13P31271 388 aaPredicted RBP12.76□□□□□ -0.37
LINC00963-214ENST00000622680 HSD17B4P51659 736 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 PTK7Q13308 1070 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 CCDC178Q5BJE1 867 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 DHX37Q8IY37 1157 aaKnown RBP12.76□□□□□ -0.37
LINC00963-214ENST00000622680 PPTC7Q8NI37 304 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 ANKS1AQ92625 1134 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
LINC00963-214ENST00000622680 KATNAL1Q9BW62 490 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 C1QTNF1Q9BXJ1 281 aa12.76□□□□□ -0.37
LINC00963-214ENST00000622680 FAM86C2PA6NEL3 165 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 EIF3JO75822 258 aaKnown RBP12.75□□□□□ -0.37
LINC00963-214ENST00000622680 GGPS1O95749 300 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 UBA1P22314 1058 aaKnown RBP12.75□□□□□ -0.37
LINC00963-214ENST00000622680 LAMC2Q13753 1193 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 IMMTQ16891 758 aaKnown RBP12.75□□□□□ -0.37
LINC00963-214ENST00000622680 SLC35G1Q2M3R5 365 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 HSDL1Q3SXM5 330 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 IFIT1BQ5T764 474 aaKnown RBP12.75□□□□□ -0.37
LINC00963-214ENST00000622680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00963-214ENST00000622680 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 PDCD2LQ9BRP1 358 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 LRFN3Q9BTN0 628 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 AMNQ9BXJ7 453 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
LINC00963-214ENST00000622680 ABHD14A-ACY1A0A1B0GW23 586 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 PARNO95453 639 aaKnown RBP12.74□□□□□ -0.37
LINC00963-214ENST00000622680 HOXD8P13378 290 aaPredicted RBP12.74□□□□□ -0.37
LINC00963-214ENST00000622680 ERVK-21P61565 698 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 SP2Q02086 613 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 IKBKEQ14164 716 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 PGM5Q15124 567 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 MYSM1Q5VVJ2 828 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 MYOCDQ8IZQ8 938 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 FAM122AQ96E09 287 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 SPATA33Q96N06 139 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 TGS1Q96RS0 853 aaKnown RBP12.74□□□□□ -0.37
LINC00963-214ENST00000622680 RAD9AQ99638 391 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 C17orf80Q9BSJ5 609 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 OSBPL7Q9BZF2 842 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 MAF1Q9H063 256 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 BCAS3Q9H6U6 928 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 CD320Q9NPF0 282 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
LINC00963-214ENST00000622680 KLRF2D3W0D1 207 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 ZBTB5O15062 677 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 LGR5O75473 907 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 IGHDP01880 384 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 CTSHP09668 335 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 THPOP40225 353 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 GHRHRQ02643 423 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 SEC23AQ15436 765 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 CELF3Q5SZQ8 465 aaKnown RBP12.73□□□□□ -0.37
LINC00963-214ENST00000622680 SERINC5Q86VE9 423 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 KRT23Q9C075 422 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 UBE2ZQ9H832 354 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-214ENST00000622680 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 C11orf16Q9NQ32 467 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 PCDHA1Q9Y5I3 950 aa12.73□□□□□ -0.37
LINC00963-214ENST00000622680 LGALS2P05162 132 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 NUCB1Q02818 461 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
LINC00963-214ENST00000622680 STOX1Q6ZVD7 989 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 FCHSD1Q86WN1 690 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 DBF4BQ8NFT6 615 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 PIGSQ96S52 555 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 C16orf70Q9BSU1 422 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 LMCD1Q9NZU5 365 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 TELO2Q9Y4R8 837 aa12.72□□□□□ -0.37
LINC00963-214ENST00000622680 EMSYQ7Z589 1322 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 RSPH10B2B2RC85 870 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 TREHO43280 583 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 EFCAB14O75071 495 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 RSPH10BP0C881 870 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms