RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PLCH1Q4KWH8 1693 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 A0A1B0GVG6 124 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 ZNF233A6NK53 670 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 WNT7AO00755 349 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 POLR2DO15514 142 aaKnown RBP8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 EVI5O60447 810 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 GSTA2P09210 222 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 CLTAP09496 248 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 CYP19A1P11511 503 aaPredicted RBP8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 NQO1P15559 274 aaKnown RBP8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 IFNAR1P17181 557 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 PTPREP23469 700 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 VAV2P52735 878 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 C2orf54Q08AI8 447 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 ADAM9Q13443 819 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 MORC3Q14149 939 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 PUM3Q15397 648 aaKnown RBP8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 SLC4A8Q2Y0W8 1093 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 AKNAD1Q5T1N1 836 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 ANKS4BQ8N8V4 417 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 CCDC197Q8NCU1 140 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 VCX3BQ9H321 246 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 VCX3AQ9NNX9 186 aa8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 SAMSN1Q9NSI8 373 aaKnown RBP8.23□□□□□ -1.09
TRIM49B-202ENST00000622138 SPDYE5A6NIY4 337 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 STARD3NLO95772 234 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 KRT14P02533 472 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 UQCRFS1P1P0C7P4 283 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 CCDC166P0CW27 439 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 CASP1P29466 404 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 CASP14P31944 242 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 MAGEA10P43363 369 aaPredicted RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 SARSP49591 514 aaKnown RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 INHBCP55103 352 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 ERVK-24P63145 666 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 KIF5AQ12840 1032 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 MPP3Q13368 585 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 BIRC3Q13489 604 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 QPCTQ16769 361 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 RTN1Q16799 776 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 EARS2Q5JPH6 523 aaKnown RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 ANO7Q6IWH7 933 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 ADGRA1Q86SQ6 560 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 PNMA8AQ86V59 439 aaPredicted RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 MIGA1Q8NAN2 632 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 SMYD1Q8NB12 490 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 PROCA1Q8NCQ7 364 aaPredicted RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 HDAC7Q8WUI4 952 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 LPIN2Q92539 896 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 IFT43Q96FT9 208 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 CAPZA3Q96KX2 299 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 CCDC43Q96MW1 224 aaKnown RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 FAM167BQ9BTA0 163 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 PHACTR1Q9C0D0 580 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 TMBIM4Q9HC24 238 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 AATFQ9NY61 560 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 SLC4A7Q9Y6M7 1214 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 AFF2P51816 1311 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 SOS2Q07890 1332 aaPredicted RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 CICQ96RK0 1608 aaPredicted RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 hCG_1642624A0A1W2PR95 340 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 PDE8AO60658 829 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 TMCC1O94876 653 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 GYPCP04921 128 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 ATP6V1C1P21283 382 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 SP100P23497 879 aaPredicted RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 ZNF131P52739 623 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 KBTBD12Q3ZCT8 623 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 NT5DC1Q5TFE4 455 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 CCDC80Q76M96 950 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 FGD4Q96M96 766 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 FAM192AQ9GZU8 254 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 CSRNP2Q9H175 543 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 UNC45AQ9H3U1 944 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 ABHD10Q9NUJ1 306 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 GALNT8Q9NY28 637 aa8.22□□□□□ -1.09
TRIM49B-202ENST00000622138 TMEM221A6NGB7 291 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 ORC4O43929 436 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 PARP1P09874 1014 aaKnown RBP8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 CD44P16070 742 aaKnown RBP8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 ACADSP16219 412 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 DRD4P21917 467 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 PAX3P23760 479 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 BCAMP50895 628 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 HSPA2P54652 639 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 LACTBP83111 547 aaPredicted RBP8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 KLC1Q07866 573 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 CUL4BQ13620 913 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 WTAPQ15007 396 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 AGBL2Q5U5Z8 902 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 MFSD6Q6ZSS7 791 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 APTXQ7Z2E3 356 aaKnown RBP8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 ARHGAP18Q8N392 663 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 CRACR2BQ8N4Y2 399 aaPredicted RBP8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 WHAMMQ8TF30 809 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 PIDD1Q9HB75 910 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms