RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RNASE9P60153 205 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 MECOMQ03112 1051 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 KCNJ12Q14500 433 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 TERB1Q8NA31 727 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 ATP11BQ9Y2G3 1177 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 FLT4P35916 1363 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 PGRMC1O00264 195 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 IGHDP01880 384 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 MYL1P05976 194 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 PDE1BQ01064 536 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 PATL1Q86TB9 770 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 CRLF3Q8IUI8 442 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 ZBTB18Q99592 522 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 KIAA1468Q9P260 1216 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 TSC22D4Q9Y3Q8 395 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 C16orf96A6NNT2 1141 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 MYO1CO00159 1063 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 ATF7P17544 494 aaPredicted RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 RASSF7Q02833 373 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 BRIP1Q9BX63 1249 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 TM6SF1Q9BZW5 370 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 XPO4Q9C0E2 1151 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 SLC38A10Q9HBR0 1119 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 BLOC1S6Q9UL45 172 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 EIF2AK4Q9P2K8 1649 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 GRM8O00222 908 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 A1BGP04217 495 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 H2AFZP0C0S5 128 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 PARP10Q53GL7 1025 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 USPL1Q5W0Q7 1092 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 H2AFVQ71UI9 128 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 DHX38Q92620 1227 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 WARS2Q9UGM6 360 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 ANGEL1Q9UNK9 670 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 INSRP06213 1382 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 SPDYE16A6NNV3 312 aaPredicted RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 TCP10L2B9ZVM9 353 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 EXOC3O60645 756 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 PPARGP37231 505 aaPredicted RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 GUCY2DQ02846 1103 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 SPDYE2Q495Y8 402 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 SLC9C2Q5TAH2 1124 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 CENPUQ71F23 418 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 SYT2Q8N9I0 419 aaPredicted RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 NEK9Q8TD19 979 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 C19orf60Q96EN9 201 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 FTOQ9C0B1 505 aaKnown RBP eCLIP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 UBE4BO95155 1302 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 CHMLP26374 656 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 CCDC15Q0P6D6 951 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 TTC6Q86TZ1 520 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 LGR6Q9HBX8 967 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 KRT16P08779 473 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 MYCLP12524 364 aaPredicted RBP7.73□□□□□ -1.17
COLCA1-205ENST00000620864 NPR1P16066 1061 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 BRINP3Q76B58 766 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 NAF1Q96HR8 494 aaKnown RBP7.73□□□□□ -1.17
COLCA1-205ENST00000620864 RRAGCQ9HB90 399 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 SYBUQ9NX95 663 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 MCM9Q9NXL9 1143 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 EPN1Q9Y6I3 576 aaPredicted RBP7.73□□□□□ -1.17
COLCA1-205ENST00000620864 KIAA0232Q92628 1395 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 E7ENQ6 273 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 FOXP2O15409 715 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 GYG2O15488 501 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 S100A5P33763 92 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 SPARCL1Q14515 664 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 KIF12Q96FN5 646 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 EYA1Q99502 592 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 AZI2Q9H6S1 392 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 NDUFA13Q9P0J0 144 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 SUN2Q9UH99 717 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 USTQ9Y2C2 406 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 PPP2R5CQ13362 524 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 DTX3LQ8TDB6 740 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 IL1RL1Q01638 556 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 LRMPQ12912 555 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 MTHFSDQ2M296 383 aaKnown RBP7.73□□□□□ -1.17
COLCA1-205ENST00000620864 TMTC4Q5T4D3 741 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 TAB2Q9NYJ8 693 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 PODXLO00592 558 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 TFAP4Q01664 338 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 NNTQ13423 1086 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 TRIM63Q969Q1 353 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 TLK1Q9UKI8 766 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 CCNT1O60563 726 aaKnown RBP7.73□□□□□ -1.17
COLCA1-205ENST00000620864 MT-ND3P03897 115 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 TERF2Q15554 542 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 MAPRE2Q15555 327 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 E2F4Q16254 413 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 AAK1Q2M2I8 961 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 NEK8Q86SG6 692 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF653Q96CK0 615 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 DACH2Q96NX9 599 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 GINS4Q9BRT9 223 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 LSM14BQ9BX40 385 aaKnown RBP7.73□□□□□ -1.17
COLCA1-205ENST00000620864 MOV10L1Q9BXT6 1211 aaKnown RBP7.73□□□□□ -1.17
COLCA1-205ENST00000620864 DCDC2Q9UHG0 476 aa7.73□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF229Q9UJW7 825 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms