RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 DCAF4Q8WV16 495 aa10.16□□□□□ -0.78
RBFOX1-223ENST00000620507 TDRD3Q9H7E2 651 aaKnown RBP10.16□□□□□ -0.78
RBFOX1-223ENST00000620507 PDE11AQ9HCR9 933 aa10.16□□□□□ -0.78
RBFOX1-223ENST00000620507 RABGAP1Q9Y3P9 1069 aa10.16□□□□□ -0.78
RBFOX1-223ENST00000620507 HYOU1Q9Y4L1 999 aa10.16□□□□□ -0.78
RBFOX1-223ENST00000620507 POTEB3A0JP26 581 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 POTECB2RU33 542 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 GCOM1H8Y6P7 765 aaPredicted RBP10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 DDX39AO00148 427 aaKnown RBP10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 POLR2MP0CAP2 368 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 HOXA13P31271 388 aaPredicted RBP10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 COASYQ13057 564 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 IL17AQ16552 155 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 KIAA0753Q2KHM9 967 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 POTEBQ6S5H4 581 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 MAEAQ7L5Y9 396 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 CPXCR1Q8N123 301 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 TSKSQ9UJT2 592 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 ARHGAP4P98171 946 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 AP3B2Q13367 1082 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 TERF2Q15554 542 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 PROM2Q8N271 834 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 FNBP4Q8N3X1 1017 aaPredicted RBP10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 GJA10Q969M2 543 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 HINFPQ9BQA5 517 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 FAM184BQ9ULE4 1060 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 JRKLQ9Y4A0 524 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 PCDHA13Q9Y5I0 950 aa10.15□□□□□ -0.78
RBFOX1-223ENST00000620507 SRGAP2O75044 1071 aa10.15□□□□□ -0.79
RBFOX1-223ENST00000620507 FLOT1O75955 427 aa10.15□□□□□ -0.79
RBFOX1-223ENST00000620507 ERVK-24P63145 666 aa10.15□□□□□ -0.79
RBFOX1-223ENST00000620507 TTI2Q6NXR4 508 aa10.15□□□□□ -0.79
RBFOX1-223ENST00000620507 HHIPL2Q6UWX4 724 aa10.15□□□□□ -0.79
RBFOX1-223ENST00000620507 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.79
RBFOX1-223ENST00000620507 STK32BQ9NY57 414 aa10.15□□□□□ -0.79
RBFOX1-223ENST00000620507 NUP188Q5SRE5 1749 aa10.15□□□□□ -0.79
RBFOX1-223ENST00000620507 SLC37A4O43826 429 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 OPA1O60313 960 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 STAT2P52630 851 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 TNNC1P63316 161 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 EXOC3L4Q17RC7 722 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 LRRN4CLQ8ND94 238 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 JDP2Q8WYK2 163 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 RIOX1Q9H6W3 641 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 METTL14Q9HCE5 456 aaKnown RBP10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 LRRC10BA6NIK2 292 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 EIF3CLB5ME19 914 aaKnown RBP10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 ECE2O60344 883 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 ZMYND10O75800 440 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 FXR2P51116 673 aaKnown RBP eCLIP10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 USP11P51784 963 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 PMS1P54277 932 aaKnown RBP10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 UBXN2AP68543 259 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 LRCH2Q5VUJ6 765 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 MAATS1Q7Z4T9 603 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 EIF3CQ99613 913 aaKnown RBP10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 BHMT2Q9H2M3 363 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 ABCB6Q9NP58 842 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 HDAC6Q9UBN7 1215 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 TRIM10Q9UDY6 481 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 MRPL11Q9Y3B7 192 aaKnown RBP10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 BCL9LQ86UU0 1499 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 LRRC53A6NM62 1247 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 EXOC3O60645 756 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 MOCS3O95396 460 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 H2AFXP16104 143 aaPredicted RBP10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 NPY5RQ15761 445 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 SND1Q7KZF4 910 aaKnown RBP eCLIP10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 FAM178BQ8IXR5 827 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 RDH13Q8NBN7 331 aa10.14□□□□□ -0.79
RBFOX1-223ENST00000620507 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 CXCR5P32302 372 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 POTEEQ6S8J3 1075 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 GBP6Q6ZN66 633 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 C15orf52Q6ZUT6 534 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 KRT26Q7Z3Y9 468 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 SHTN1A0MZ66 631 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 GOLGA6BA6NDN3 693 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 STAT3P40763 770 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 RHBDL3P58872 404 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 NFIAQ12857 509 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 RPS6KA1Q15418 735 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 CCDC93Q567U6 631 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 NUP98P52948 1817 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 KLK7P49862 253 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 GRB10Q13322 594 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 PPP4R3AQ6IN85 833 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 CNPY4Q8N129 248 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 FAM133AQ8N9E0 248 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 HOMER2Q9NSB8 354 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 STRCP1A6NGW2 1772 aa10.13□□□□□ -0.79
RBFOX1-223ENST00000620507 RAD17O75943 681 aa10.12□□□□□ -0.79
RBFOX1-223ENST00000620507 STAT1P42224 750 aa10.12□□□□□ -0.79
RBFOX1-223ENST00000620507 CYP2J2P51589 502 aa10.12□□□□□ -0.79
RBFOX1-223ENST00000620507 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
RBFOX1-223ENST00000620507 FMNL3Q8IVF7 1028 aa10.12□□□□□ -0.79
RBFOX1-223ENST00000620507 IFT20Q8IY31 132 aa10.12□□□□□ -0.79
RBFOX1-223ENST00000620507 LRRC4BQ9NT99 713 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms