RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 ANO9A1A5B4 782 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 EIF3CLB5ME19 914 aaKnown RBP10.95□□□□□ -0.66
CDH23-213ENST00000619887 OAS2P29728 719 aaKnown RBP10.95□□□□□ -0.66
CDH23-213ENST00000619887 STAT2P52630 851 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 NIM1KQ8IY84 436 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 EIF3CQ99613 913 aaKnown RBP10.95□□□□□ -0.66
CDH23-213ENST00000619887 BZW2Q9Y6E2 419 aaKnown RBP10.95□□□□□ -0.66
CDH23-213ENST00000619887 PNMA6AP0CW24 399 aaPredicted RBP10.95□□□□□ -0.66
CDH23-213ENST00000619887 ARHGAP4P98171 946 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 COASYQ13057 564 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 PRPF4BQ13523 1007 aaKnown RBP10.95□□□□□ -0.66
CDH23-213ENST00000619887 CRY2Q49AN0 593 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 CFAP221Q4G0U5 840 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 CCDC174Q6PII3 467 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 TAX1BP1Q86VP1 789 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 EHD4Q9H223 541 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 JMJD4Q9H9V9 463 aa10.95□□□□□ -0.66
CDH23-213ENST00000619887 ZHX1Q9UKY1 873 aaPredicted RBP10.95□□□□□ -0.66
CDH23-213ENST00000619887 AKAP11Q9UKA4 1901 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 FCER1AP12319 257 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 NR2F2P24468 414 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 LONRF2Q1L5Z9 754 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 GBP6Q6ZN66 633 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 TPH2Q8IWU9 490 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 WDR11Q9BZH6 1224 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 TCP10L2B9ZVM9 353 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 CYTH3O43739 400 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 POLR2FP61218 127 aaKnown RBP10.94□□□□□ -0.66
CDH23-213ENST00000619887 STK4Q13043 487 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 PABPC4Q13310 644 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDH23-213ENST00000619887 HLTFQ14527 1009 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDH23-213ENST00000619887 C8orf74Q6P047 294 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 ZNF384Q8TF68 577 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 ZNF408Q9H9D4 720 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 JRKLQ9Y4A0 524 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 COL1A1P02452 1464 aaPredicted RBP10.94□□□□□ -0.66
CDH23-213ENST00000619887 LRRC10BA6NIK2 292 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L15C9J2P7 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L13C9JLJ4 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L11C9JVI0 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L18D6R9N7 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L22D6RA61 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L17D6RBQ6 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L19D6RCP7 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L20D6RJB6 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 F5H6K3 240 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 POTEJP0CG39 1038 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 KLRC3Q07444 240 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 DMTNQ08495 405 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L24Q0WX57 530 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 USP17L6PQ6QN14 398 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 PTF1AQ7RTS3 328 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 FAM160B2Q86V87 743 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 GPIHBP1Q8IV16 184 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 TEKT3Q9BXF9 490 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 VPS18Q9P253 973 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 ABCB11O95342 1321 aa10.94□□□□□ -0.66
CDH23-213ENST00000619887 LRP5O75197 1615 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 TIAM2Q8IVF5 1701 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 GOLGA6L10A0A0M3HER8 536 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 KIF11P52732 1056 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 LRCH2Q5VUJ6 765 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 TTBK2Q6IQ55 1244 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 INTS13Q9NVM9 706 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 BCS1LQ9Y276 419 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 POLRMTO00411 1230 aaKnown RBP10.93□□□□□ -0.66
CDH23-213ENST00000619887 TBX3O15119 743 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 GH2P01242 217 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 EIF4A3P38919 411 aaKnown RBP10.93□□□□□ -0.66
CDH23-213ENST00000619887 CACNB3P54284 484 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 RHBDL3P58872 404 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 NAALADL2Q58DX5 795 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 TTI2Q6NXR4 508 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 HERC5Q9UII4 1024 aaKnown RBP10.93□□□□□ -0.66
CDH23-213ENST00000619887 A0A1W2PQJ5 194 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 MYMKA6NI61 221 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 ZBTB22O15209 634 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 ENTPD3O75355 529 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 IVLP07476 585 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 TNFAIP1Q13829 316 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 CCDC93Q567U6 631 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 MCF2L2Q86YR7 1114 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 ERGIC2Q96RQ1 377 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 HOMER2Q9NSB8 354 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 CEP72Q9P209 647 aa10.93□□□□□ -0.66
CDH23-213ENST00000619887 DKC1O60832 514 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDH23-213ENST00000619887 AFPP02771 609 aaKnown RBP10.92□□□□□ -0.66
CDH23-213ENST00000619887 SERPING1P05155 500 aa10.92□□□□□ -0.66
CDH23-213ENST00000619887 CYP4A11Q02928 519 aa10.92□□□□□ -0.66
CDH23-213ENST00000619887 EXOC3L4Q17RC7 722 aa10.92□□□□□ -0.66
CDH23-213ENST00000619887 CTNNBL1Q8WYA6 563 aaPredicted RBP10.92□□□□□ -0.66
CDH23-213ENST00000619887 PCDHA13Q9Y5I0 950 aa10.92□□□□□ -0.66
CDH23-213ENST00000619887 BAG6P46379 1132 aa10.92□□□□□ -0.66
CDH23-213ENST00000619887 CC2D1AQ6P1N0 951 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms