RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 EMILIN3Q9NT22 766 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 VAV3Q9UKW4 847 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 PLA2G4BP0C869 781 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 VCAM1P19320 739 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 COBLL1Q53SF7 1204 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 CATSPER3Q86XQ3 398 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 TMEM139Q8IV31 216 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 CSGALNACT2Q8N6G5 542 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 EEF2KMTQ96G04 330 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 ZFP91Q96JP5 570 aaPredicted RBP19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 WRNIP1Q96S55 665 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 KCND1Q9NSA2 647 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 GGA3Q9NZ52 723 aa19.36■□□□□ 0.69
PCDHGC3-205ENST00000617641 BICDL2A1A5D9 508 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 SLC26A4O43511 780 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 TNNT1P13805 278 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 PPP1R2P41236 205 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 SPP2Q13103 211 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 SLC30A10Q6XR72 485 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 CPXCR1Q8N123 301 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 FLOT1O75955 427 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 LMNB1P20700 586 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 EPS15P42566 896 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 KCNJ6P48051 423 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 TERF1P54274 439 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 EHHADHQ08426 723 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 CEP135Q66GS9 1140 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 SCYL3Q8IZE3 742 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 ERMNQ8TAM6 284 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 SEMA6BQ9H3T3 888 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 ZNF112Q9UJU3 913 aa19.35■□□□□ 0.69
PCDHGC3-205ENST00000617641 MEIS1O00470 390 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 NFIBO00712 420 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 SPATA31C1P0DKV0 1188 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 COASYQ13057 564 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 GPBP1Q86WP2 473 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 GPC2Q8N158 579 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 GLIS3Q8NEA6 775 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 RPAP3Q9H6T3 665 aaPredicted RBP19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 EHMT1Q9H9B1 1298 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 RAVER2Q9HCJ3 691 aaKnown RBP19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 NPHP3-ACAD11A0A0J9YXS1 232 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 RPA1P27694 616 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 HIRAP54198 1017 aaPredicted RBP19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 RBL2Q08999 1139 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 PPFIBP1Q86W92 1011 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 NOC3LQ8WTT2 800 aaKnown RBP19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 CPLX3Q8WVH0 158 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 CLEC4DQ8WXI8 215 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 SLC38A10Q9HBR0 1119 aa19.34■□□□□ 0.69
PCDHGC3-205ENST00000617641 DICER1Q9UPY3 1922 aaKnown RBP19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 AKR1B15C9JRZ8 316 aaPredicted RBP19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 EML1O00423 815 aa19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 ALAS1P13196 640 aa19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 EEF1GP26641 437 aaKnown RBP19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 HSD17B4P51659 736 aa19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 PSMC6P62333 389 aa19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 LRRC41Q15345 812 aa19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 BAG1Q99933 345 aaPredicted RBP19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 HOMER2Q9NSB8 354 aa19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 BMP2KQ9NSY1 1161 aaPredicted RBP19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 PANK4Q9NVE7 773 aa19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 COL20A1Q9P218 1284 aa19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 MAGEC2Q9UBF1 373 aaPredicted RBP19.33■□□□□ 0.69
PCDHGC3-205ENST00000617641 PTPRAP18433 802 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 CYP11B2P19099 503 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 SLC12A3P55017 1021 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 CACNB1Q02641 598 aaPredicted RBP19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 CYP4A11Q02928 519 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 RAD51AP2Q09MP3 1159 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 NYAP1Q6ZVC0 841 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 PPP1R13BQ96KQ4 1090 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 PICK1Q9NRD5 415 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 PPP1R9AQ9ULJ8 1098 aa19.33■□□□□ 0.68
PCDHGC3-205ENST00000617641 ITIH6Q6UXX5 1313 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 UQCRHLA0A096LP55 91 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 UQCRHP07919 91 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 USP14P54578 494 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 UBXN1Q04323 297 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 PSMD2Q13200 908 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 CEP55Q53EZ4 464 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 CENPPQ6IPU0 288 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 GUF1Q8N442 669 aaKnown RBP19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 PRIMPOLQ96LW4 560 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 SPON1Q9HCB6 807 aa19.32■□□□□ 0.68
PCDHGC3-205ENST00000617641 BACE1P56817 501 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 PABPC4Q13310 644 aaKnown RBP eCLIP19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 PTPN14Q15678 1187 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 MUM1L1Q5H9M0 696 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 LRCH2Q5VUJ6 765 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 EIF2AK1Q9BQI3 630 aaKnown RBP19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 FHDC1Q9C0D6 1143 aaPredicted RBP19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 LGALS16A8MUM7 142 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 PES1O00541 588 aaKnown RBP19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 PSMD10O75832 226 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 GYPCP04921 128 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 ARSHQ5FYA8 562 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 ZNF280CQ8ND82 737 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 SLC5A5Q92911 643 aa19.31■□□□□ 0.68
PCDHGC3-205ENST00000617641 CNOT6LQ96LI5 555 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms