RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CDC25AP30304 524 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 BCAMP50895 628 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 TMED1Q13445 227 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 KRT80Q6KB66 452 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 LRRC43Q8N309 656 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 AZI2Q9H6S1 392 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 SCINQ9Y6U3 715 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 GFPT2O94808 682 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 ARL6IP4Q66PJ3 421 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 TTBK2Q6IQ55 1244 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 NLRP14Q86W24 1093 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 MORC4Q8TE76 937 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 AIFM3Q96NN9 605 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 NCAPGQ9BPX3 1015 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 YY1AP1Q9H869 796 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 LGALS16A8MUM7 142 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 NOP56O00567 594 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 FOSP01100 380 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 GAP43P17677 238 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 ADORA1P30542 326 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 PHKA1P46020 1223 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 KCNJ6P48051 423 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 RPS8P62241 208 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 CYP4A11Q02928 519 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 POLA2Q14181 598 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 RINT1Q6NUQ1 792 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 PDZD4Q76G19 769 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 ARMC2Q8NEN0 867 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 RASGRP4Q8TDF6 673 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 CHURC1Q8WUH1 139 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 BAG5Q9UL15 447 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 PTCH1Q13635 1447 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 CREB3O43889 395 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 MYO1EQ12965 1108 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 TOB2Q14106 344 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 ZC3H18Q86VM9 953 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 CCDC87Q9NVE4 849 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 FRMPD2Q68DX3 1309 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 GNPATO15228 680 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 PRPF3O43395 683 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 APOEP02649 317 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 FGGP02679 453 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 PPP2R2AP63151 447 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 PABPC4Q13310 644 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 GOLPH3LQ9H4A5 285 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 KLC4Q9NSK0 619 aa11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 PACSIN2Q9UNF0 486 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-209ENST00000617103 GYG1P46976 350 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 XKR9Q5GH70 373 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 BEND6Q5SZJ8 279 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 SYT2Q8N9I0 419 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 DIS3Q9Y2L1 958 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 CFAP73A6NFT4 308 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 H0Y3Z8 333 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 LRRN2O75325 713 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 GCFC2P16383 781 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 ADD2P35612 726 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 MAGOHP61326 146 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 SPARCL1Q14515 664 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 TAF12Q16514 161 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 PUS3Q9BZE2 481 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 HAUS2Q9NVX0 235 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 KDM5CP41229 1560 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 ZBED4O75132 1171 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 ACSL3O95573 720 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 ZSCAN20P17040 1043 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 DYNC1I2Q13409 638 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 PIP4K2CQ8TBX8 421 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 EMILIN3Q9NT22 766 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 ASXL2Q76L83 1435 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 PALMO75781 387 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 DEUP1Q05D60 604 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 GRAMD1BQ3KR37 738 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 TRAPPC3LQ5T215 181 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 CAPRIN2Q6IMN6 1127 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 PPP1R2P3Q6NXS1 205 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 FBXO11Q86XK2 927 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 INTUQ9ULD6 942 aa11.53□□□□□ -0.56
CLTCL1-209ENST00000617103 TARSL2A2RTX5 802 aaKnown RBP11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 ERVV-2B6SEH9 535 aa11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 GYG2O15488 501 aa11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 CYP2E1P05181 493 aaPredicted RBP11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 PLCG1P19174 1290 aa11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 LLGL1Q15334 1064 aa11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 RHOT2Q8IXI1 618 aa11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 ATP6V1G3Q96LB4 118 aa11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 TEKT3Q9BXF9 490 aa11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 KCNF1Q9H3M0 494 aa11.52□□□□□ -0.56
CLTCL1-209ENST00000617103 ZSWIM5Q9P217 1185 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms