RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 PTPN22Q9Y2R2 807 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 ERFP50548 548 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 TBC1D22AQ8WUA7 517 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 TRIM51Q9BSJ1 452 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 ZCWPW1Q9H0M4 648 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 A1CFQ9NQ94 594 aaKnown RBP17.1■□□□□ 0.33
SYNRG-223ENST00000616179 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 UTYO14607 1347 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 WNT7AO00755 349 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 LGR5O75473 907 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 COPB2P35606 906 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 ITGB3BPQ13352 177 aaPredicted RBP17.09■□□□□ 0.33
SYNRG-223ENST00000616179 TRPM8Q7Z2W7 1104 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 STK36Q9NRP7 1315 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 H7C1W4 665 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
SYNRG-223ENST00000616179 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 RASIP1Q5U651 963 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 YTHDF3Q7Z739 585 aaKnown RBP17.09■□□□□ 0.33
SYNRG-223ENST00000616179 STAG2Q8N3U4 1231 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 AGAP11Q8TF27 550 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 ANKARQ7Z5J8 1434 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 AGLP35573 1532 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 VPS41P49754 854 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 IQCKQ8N0W5 287 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 STMN4Q9H169 189 aaPredicted RBP17.09■□□□□ 0.33
SYNRG-223ENST00000616179 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
SYNRG-223ENST00000616179 EME2A4GXA9 379 aaPredicted RBP17.08■□□□□ 0.33
SYNRG-223ENST00000616179 CCDC160A6NGH7 325 aa17.08■□□□□ 0.33
SYNRG-223ENST00000616179 CTCFP49711 727 aaPredicted RBP17.08■□□□□ 0.33
SYNRG-223ENST00000616179 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.33
SYNRG-223ENST00000616179 MAN2A1Q16706 1144 aa17.08■□□□□ 0.33
SYNRG-223ENST00000616179 CNOT10Q9H9A5 744 aaKnown RBP17.08■□□□□ 0.33
SYNRG-223ENST00000616179 ETNK1Q9HBU6 452 aa17.08■□□□□ 0.33
SYNRG-223ENST00000616179 NKIRAS1Q9NYS0 192 aa17.08■□□□□ 0.33
SYNRG-223ENST00000616179 C21orf2O43822 256 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 ATP2A2P16615 1042 aaKnown RBP17.08■□□□□ 0.32
SYNRG-223ENST00000616179 CUL1Q13616 776 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 TAOK1Q7L7X3 1001 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 ELOA2Q8IYF1 753 aaPredicted RBP17.08■□□□□ 0.32
SYNRG-223ENST00000616179 NMT2O60551 498 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 FGGP02679 453 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 CALM1P0DP23 149 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 CALM2P0DP24 149 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 CALM3P0DP25 149 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 RAD23BP54727 409 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 RWDD2BP57060 319 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 CCHCR1Q8TD31 782 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 LPIN2Q92539 896 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 ZMYND12Q9H0C1 365 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 VCXQ9H320 206 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 PANK4Q9NVE7 773 aa17.08■□□□□ 0.32
SYNRG-223ENST00000616179 PDS5AQ29RF7 1337 aaKnown RBP17.08■□□□□ 0.32
SYNRG-223ENST00000616179 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 BCAMP50895 628 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 ATP2C1P98194 919 aaPredicted RBP17.07■□□□□ 0.32
SYNRG-223ENST00000616179 GNAT2P19087 354 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 HOMER3Q9NSC5 361 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
SYNRG-223ENST00000616179 SERPINA10Q9UK55 444 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 DAAM1Q9Y4D1 1078 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 LMTK2Q8IWU2 1503 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 LRRC10BA6NIK2 292 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 DCDC2CA8MYV0 355 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 USP17L12C9JPN9 530 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 USP17L21D6R901 530 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 CETN3O15182 167 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 UBOX5O94941 541 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 SNUPNO95149 360 aaKnown RBP17.07■□□□□ 0.32
SYNRG-223ENST00000616179 GNAT1P11488 350 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 ZNF211Q13398 564 aaPredicted RBP17.07■□□□□ 0.32
SYNRG-223ENST00000616179 BZW1Q7L1Q6 419 aaKnown RBP17.07■□□□□ 0.32
SYNRG-223ENST00000616179 CCDC105Q8IYK2 499 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 NEK9Q8TD19 979 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 RAB17Q9H0T7 212 aa17.07■□□□□ 0.32
SYNRG-223ENST00000616179 NUCKS1Q9H1E3 243 aaKnown RBP17.07■□□□□ 0.32
SYNRG-223ENST00000616179 DBR1Q9UK59 544 aaKnown RBP17.07■□□□□ 0.32
SYNRG-223ENST00000616179 GOLGA8HP0CJ92 632 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 ZNF844Q08AG5 666 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 CALCOCO2Q13137 446 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 KLHDC7AQ5VTJ3 777 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 RIMS1Q86UR5 1692 aaKnown RBP17.06■□□□□ 0.32
SYNRG-223ENST00000616179 KCNJ2P63252 427 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 ZBTB16Q05516 673 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 SPRED3Q2MJR0 410 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 FAXDC2Q96IV6 333 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 GBP5Q96PP8 586 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 PACSIN1Q9BY11 444 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.32
SYNRG-223ENST00000616179 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 FRMPD1Q5SYB0 1578 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 ZNF263O14978 683 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 ERVK-9P63128 1117 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 SPICE1Q8N0Z3 855 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 FGFR1OP2Q9NVK5 253 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms