RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 EPB42P16452 691 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 TFCP2Q12800 502 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 TRIM32Q13049 653 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 PAK1Q13153 545 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 ASPSCR1Q9BZE9 553 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 UPP2O95045 317 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 EIF3CQ99613 913 aaKnown RBP13.65□□□□□ -0.22
TCF4-248ENST00000616053 ELP1O95163 1332 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 TAF5LO75529 589 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 NR5A1Q13285 461 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 TTC38Q5R3I4 469 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 FAM117BQ6P1L5 589 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 DDX42Q86XP3 938 aaKnown RBP eCLIP13.65□□□□□ -0.22
TCF4-248ENST00000616053 CAPN10Q9HC96 672 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 ZNF304Q9HCX3 659 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 KLHL14Q9P2G3 628 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 LARSQ9P2J5 1176 aaKnown RBP13.65□□□□□ -0.22
TCF4-248ENST00000616053 STRIP2Q9ULQ0 834 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 TRPC1P48995 793 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 POSTNQ15063 836 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 KRT78Q8N1N4 520 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 TUBBP07437 444 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 GCKP35557 465 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 PRIM1P49642 420 aaKnown RBP13.64□□□□□ -0.23
TCF4-248ENST00000616053 IGSF22Q8N9C0 903 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 NLRP4Q96MN2 994 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 CCT7Q99832 543 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
TCF4-248ENST00000616053 ANGEL1Q9UNK9 670 aaKnown RBP13.64□□□□□ -0.23
TCF4-248ENST00000616053 MAP4P27816 1152 aaKnown RBP13.64□□□□□ -0.23
TCF4-248ENST00000616053 MTBPQ96DY7 904 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 HEXIM2Q96MH2 286 aaKnown RBP13.64□□□□□ -0.23
TCF4-248ENST00000616053 TRIM62Q9BVG3 475 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 FPGT-TNNI3KV9GXZ4 949 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 SYCE1LA8MT33 242 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 GOLGA8SH3BPF8 625 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 DYRK3O43781 588 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 WHAMMP3Q1A5X7 153 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 MFN1Q8IWA4 741 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 DDX50Q9BQ39 737 aaKnown RBP13.64□□□□□ -0.23
TCF4-248ENST00000616053 THEGQ9P2T0 379 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 KLF15Q9UIH9 416 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 CAPN11Q9UMQ6 739 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 ACEP12821 1306 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 PRR23AA6NEV1 266 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 PRMT3O60678 531 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 TAC1P20366 129 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 HIP1RO75146 1068 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 KCTD6Q8NC69 237 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 POLA1P09884 1462 aaPredicted RBP13.64□□□□□ -0.23
TCF4-248ENST00000616053 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
TCF4-248ENST00000616053 IQANK1A0A1B0GTG1 560 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 KRT71Q3SY84 523 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 C10orf53Q8N6V4 93 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 TRIML2Q8N7C3 387 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 IFNKQ9P0W0 207 aa13.64□□□□□ -0.23
TCF4-248ENST00000616053 TMEM232C9JQI7 657 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 NMIQ13287 307 aaPredicted RBP13.63□□□□□ -0.23
TCF4-248ENST00000616053 ADCK5Q3MIX3 580 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 ALKBH2Q6NS38 261 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 NANOGNBQ7Z5D8 188 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 TSSK1BQ9BXA7 367 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 TRIM15Q9C019 465 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 NCKAP5LQ9HCH0 1330 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 GOLGA8RI6L899 631 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 ZW10O43264 779 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 TIPRLO75663 272 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 TTC23Q5W5X9 447 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 OR6B3Q8NGW1 331 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 FAM129AQ9BZQ8 928 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 TRIM37O94972 964 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 MAGEA1P43355 309 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 PSMC1P62191 440 aaKnown RBP13.63□□□□□ -0.23
TCF4-248ENST00000616053 CFAP221Q4G0U5 840 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 TRIM68Q6AZZ1 485 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 ARMC2Q8NEN0 867 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 SSH1Q8WYL5 1049 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 SSTR3P32745 418 aaPredicted RBP13.63□□□□□ -0.23
TCF4-248ENST00000616053 NCALDP61601 193 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 OR6B2Q6IFH4 312 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 TACO1Q9BSH4 297 aaKnown RBP13.63□□□□□ -0.23
TCF4-248ENST00000616053 FBXL5Q9UKA1 691 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 CAPN7Q9Y6W3 813 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
TCF4-248ENST00000616053 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
TCF4-248ENST00000616053 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 NDE1Q9NXR1 346 aa13.63□□□□□ -0.23
TCF4-248ENST00000616053 POTEB3A0JP26 581 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 KDM1AO60341 852 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 TFAP4Q01664 338 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 POTEBQ6S5H4 581 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 TAS2R42Q7RTR8 314 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 NAPGQ99747 312 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms