RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 ENAHQ8N8S7 591 aaPredicted RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 RGS22Q8NE09 1264 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 GPT2Q8TD30 523 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 GAS2L1Q99501 681 aaPredicted RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 SCAND2PQ9GZW5 306 aaPredicted RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 RBM28Q9NW13 759 aaKnown RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 CXXC1Q9P0U4 656 aaPredicted RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 GNEQ9Y223 722 aaKnown RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
COL4A1-205ENST00000615732 FDPSP14324 419 aaKnown RBP12.31□□□□□ -0.44
COL4A1-205ENST00000615732 IFNAR1P17181 557 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 NKX3-2P78367 333 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 GNL2Q13823 731 aaKnown RBP12.31□□□□□ -0.44
COL4A1-205ENST00000615732 SYDE2Q5VT97 1194 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 SLC30A10Q6XR72 485 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 DCAF4Q8WV16 495 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 SPATA32Q96LK8 384 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 KAT14Q9H8E8 782 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 CFAP45Q9UL16 551 aa12.31□□□□□ -0.44
COL4A1-205ENST00000615732 GOLGA6L4A6NEF3 574 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 PLA2G6O60733 806 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 GADD45BO75293 160 aaPredicted RBP12.3□□□□□ -0.44
COL4A1-205ENST00000615732 ICAM1P05362 532 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 CCL23P55773 120 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 ITGA7Q13683 1181 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
COL4A1-205ENST00000615732 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 PPP4R3BQ5MIZ7 849 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 ATL3Q6DD88 541 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 TAPT1Q6NXT6 567 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 FAM173BQ6P4H8 233 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 FANCBQ8NB91 859 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 SLC43A3Q8NBI5 491 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
COL4A1-205ENST00000615732 PPP1R13LQ8WUF5 828 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 HERVK_113Q902F9 699 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 PHKBQ93100 1093 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 AP5M1Q9H0R1 490 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 TRPV6Q9H1D0 765 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 RANBP17Q9H2T7 1088 aaKnown RBP12.3□□□□□ -0.44
COL4A1-205ENST00000615732 NKX2-4Q9H2Z4 354 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 IL23AQ9NPF7 189 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 THEGQ9P2T0 379 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 YBX2Q9Y2T7 364 aaKnown RBP12.3□□□□□ -0.44
COL4A1-205ENST00000615732 LCTP09848 1927 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 MYH15Q9Y2K3 1946 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 GRIN2DO15399 1336 aa12.3□□□□□ -0.44
COL4A1-205ENST00000615732 B4GALT4O60513 344 aa12.29□□□□□ -0.44
COL4A1-205ENST00000615732 DEXIO95424 95 aa12.29□□□□□ -0.44
COL4A1-205ENST00000615732 COL9A1P20849 921 aa12.29□□□□□ -0.44
COL4A1-205ENST00000615732 NOVP48745 357 aa12.29□□□□□ -0.44
COL4A1-205ENST00000615732 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
COL4A1-205ENST00000615732 SAFBQ15424 915 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL4A1-205ENST00000615732 RAB30Q15771 203 aa12.29□□□□□ -0.44
COL4A1-205ENST00000615732 BRAPQ7Z569 592 aa12.29□□□□□ -0.44
COL4A1-205ENST00000615732 FBXO18Q8NFZ0 1043 aa12.29□□□□□ -0.44
COL4A1-205ENST00000615732 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
COL4A1-205ENST00000615732 ASB2Q96Q27 587 aa12.29□□□□□ -0.44
COL4A1-205ENST00000615732 FAM217BQ9NTX9 383 aaPredicted RBP12.29□□□□□ -0.44
COL4A1-205ENST00000615732 PDHBP11177 359 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
COL4A1-205ENST00000615732 XBP1P17861 261 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 IGFBP4P22692 258 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 CALML3P27482 149 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 KIF5BP33176 963 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 CCDC85BQ15834 202 aaPredicted RBP12.28□□□□□ -0.44
COL4A1-205ENST00000615732 NTRK3Q16288 839 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 ZSCAN23Q3MJ62 389 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 OTOP2Q7RTS6 562 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 DGKHQ86XP1 1220 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 ADAMTS19Q8TE59 1207 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 SCLYQ96I15 445 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 NOC4LQ9BVI4 516 aaKnown RBP12.28□□□□□ -0.44
COL4A1-205ENST00000615732 WNT8AQ9H1J5 351 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 CPVLQ9H3G5 476 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 VTA1Q9NP79 307 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 TFIP11Q9UBB9 837 aaKnown RBP12.28□□□□□ -0.44
COL4A1-205ENST00000615732 RAPGEFL1Q9UHV5 662 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 MSRAQ9UJ68 235 aa12.28□□□□□ -0.44
COL4A1-205ENST00000615732 ZEB2O60315 1214 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 CABYRO75952 493 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 FGBP02675 491 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 RABGGTBP53611 331 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 CCDC183Q5T5S1 534 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 KRT40Q6A162 431 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 IQSEC1Q6DN90 963 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 BTNL9Q6UXG8 535 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 LEO1Q8WVC0 666 aaPredicted RBP12.27□□□□□ -0.45
COL4A1-205ENST00000615732 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 VWCEQ96DN2 955 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 RNF26Q9BY78 433 aaPredicted RBP12.27□□□□□ -0.45
COL4A1-205ENST00000615732 MTIF3Q9H2K0 278 aaKnown RBP12.27□□□□□ -0.45
COL4A1-205ENST00000615732 SLC28A3Q9HAS3 691 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 TRMT13Q9NUP7 481 aaKnown RBP12.27□□□□□ -0.45
COL4A1-205ENST00000615732 TRANK1O15050 2925 aa12.27□□□□□ -0.45
COL4A1-205ENST00000615732 MYL3P08590 195 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms