RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 LETM2Q2VYF4 491 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 KIAA1755Q5JYT7 1200 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 NEK8Q86SG6 692 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 RABGGTAQ92696 567 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 DESI2Q9BSY9 194 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 ST7Q9NRC1 585 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 GYPCP04921 128 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 MTF1Q14872 753 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 USH1GQ495M9 461 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 EAPPQ56P03 285 aaPredicted RBP15.49■□□□□ 0.07
COPS7B-223ENST00000611614 CABP7Q86V35 215 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 TXLNBQ8N3L3 684 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 ZNF280CQ8ND82 737 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 MRFAP1Q9Y605 127 aa15.49■□□□□ 0.07
COPS7B-223ENST00000611614 RHOBTB3O94955 611 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 PTPRAP18433 802 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 FECHP22830 423 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 SNAP25P60880 206 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 PPP2R3AQ06190 1150 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 STIM1Q13586 685 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 MTMR2Q13614 643 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 MCTP2Q6DN12 878 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 RAD9BQ6WBX8 426 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 RSRC2Q7L4I2 434 aaKnown RBP15.48■□□□□ 0.07
COPS7B-223ENST00000611614 PLIN2Q99541 437 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 WDR18Q9BV38 432 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 VPS16Q9H269 839 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 TAB2Q9NYJ8 693 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 MAPK8IP1Q9UQF2 711 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 ZHX2Q9Y6X8 837 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 ADM5C9JUS6 153 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 TUBB4BP68371 445 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 TRIM14Q14142 442 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 PNMA8AQ86V59 439 aaPredicted RBP15.48■□□□□ 0.07
COPS7B-223ENST00000611614 TBCKQ8TEA7 893 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 WDR24Q96S15 920 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 TANGO6Q9C0B7 1094 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 CTDP1Q9Y5B0 961 aaPredicted RBP15.48■□□□□ 0.07
COPS7B-223ENST00000611614 ADGRG1Q9Y653 693 aa15.48■□□□□ 0.07
COPS7B-223ENST00000611614 PLCG1P19174 1290 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 FXR1P51114 621 aaKnown RBP eCLIP15.47■□□□□ 0.07
COPS7B-223ENST00000611614 BACE1P56817 501 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 GPS2Q13227 327 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 TUBB2AQ13885 445 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 CC2D1AQ6P1N0 951 aaPredicted RBP15.47■□□□□ 0.07
COPS7B-223ENST00000611614 PRPF38AQ8NAV1 312 aaKnown RBP15.47■□□□□ 0.07
COPS7B-223ENST00000611614 GIMAP8Q8ND71 665 aaPredicted RBP15.47■□□□□ 0.07
COPS7B-223ENST00000611614 LRRC15Q8TF66 581 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 GOLGA1Q92805 767 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 TUBB2BQ9BVA1 445 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 TSPYL1Q9H0U9 437 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 MRPL44Q9H9J2 332 aaKnown RBP15.47■□□□□ 0.07
COPS7B-223ENST00000611614 FZD1Q9UP38 647 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 CSADQ9Y600 493 aa15.47■□□□□ 0.07
COPS7B-223ENST00000611614 ARFGAP3Q9NP61 516 aa15.46■□□□□ 0.07
COPS7B-223ENST00000611614 TMEM260Q9NX78 707 aa15.46■□□□□ 0.07
COPS7B-223ENST00000611614 C19orf81C9J6K1 198 aa15.46■□□□□ 0.07
COPS7B-223ENST00000611614 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
COPS7B-223ENST00000611614 UBE2SQ16763 222 aa15.46■□□□□ 0.07
COPS7B-223ENST00000611614 CCDC174Q6PII3 467 aa15.46■□□□□ 0.07
COPS7B-223ENST00000611614 IRF2BP1Q8IU81 584 aa15.46■□□□□ 0.07
COPS7B-223ENST00000611614 CCDC47Q96A33 483 aaKnown RBP15.46■□□□□ 0.07
COPS7B-223ENST00000611614 SLF1Q9BQI6 1058 aa15.46■□□□□ 0.07
COPS7B-223ENST00000611614 THAP9Q9H5L6 903 aa15.46■□□□□ 0.07
COPS7B-223ENST00000611614 TRIM49BA6NDI0 452 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 ERICH4A6NGS2 130 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 POTEB2H3BUK9 544 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 PSMA7O14818 248 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 USP2O75604 605 aaPredicted RBP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 TBC1D8O95759 1140 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 EEF1GP26641 437 aaKnown RBP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 NOL9Q5SY16 702 aaKnown RBP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 TMTC1Q8IUR5 882 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 C7orf25Q9BPX7 421 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 RANBP17Q9H2T7 1088 aaKnown RBP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 TAF1DQ9H5J8 278 aaPredicted RBP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 TMOD4Q9NZQ9 345 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 FLOT1O75955 427 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 TTLL12Q14166 644 aaPredicted RBP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 BRD3Q15059 726 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 NOC3LQ8WTT2 800 aaKnown RBP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 DHTKD1Q96HY7 919 aaPredicted RBP15.45■□□□□ 0.06
COPS7B-223ENST00000611614 FBXO28Q9NVF7 368 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
COPS7B-223ENST00000611614 SPDYE3A6NKU9 549 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 VCAM1P19320 739 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 TECP42680 631 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 PMS1P54277 932 aaKnown RBP15.44■□□□□ 0.06
COPS7B-223ENST00000611614 UBXN1Q04323 297 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 AP3B2Q13367 1082 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 TEX2Q8IWB9 1127 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 NAP1L4Q99733 375 aaKnown RBP15.44■□□□□ 0.06
COPS7B-223ENST00000611614 ABHD10Q9NUJ1 306 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 MRPL11Q9Y3B7 192 aaKnown RBP15.44■□□□□ 0.06
COPS7B-223ENST00000611614 ATAD5Q96QE3 1844 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L15C9J2P7 530 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L13C9JLJ4 530 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L11C9JVI0 530 aa15.44■□□□□ 0.06
COPS7B-223ENST00000611614 USP17L18D6R9N7 530 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms