RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 UPF2Q9HAU5 1272 aaKnown RBP9.98□□□□□ -0.81
SNCA-212ENST00000611107 SPC25Q9HBM1 224 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 NCOA5Q9HCD5 579 aaKnown RBP9.98□□□□□ -0.81
SNCA-212ENST00000611107 TMEM260Q9NX78 707 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 NAP1L2Q9ULW6 460 aaPredicted RBP9.98□□□□□ -0.81
SNCA-212ENST00000611107 TANC1Q9C0D5 1861 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 MYH9P35579 1960 aaKnown RBP9.97□□□□□ -0.81
SNCA-212ENST00000611107 CDH23Q9H251 3354 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 A0A1W2PPC1 479 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 GRXCR1A8MXD5 290 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 DCDC2CA8MYV0 355 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 ATP9AO75110 1047 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 EIF3JO75822 258 aaKnown RBP9.97□□□□□ -0.81
SNCA-212ENST00000611107 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
SNCA-212ENST00000611107 TIMP1P01033 207 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 GH1P01241 217 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 RAG1P15918 1043 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 PDIA3P30101 505 aaKnown RBP9.97□□□□□ -0.81
SNCA-212ENST00000611107 CCL23P55773 120 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 ST3GAL1Q11201 340 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 GPNMBQ14956 572 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 LRIT3Q3SXY7 679 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 MYSM1Q5VVJ2 828 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 GDF6Q6KF10 455 aaPredicted RBP9.97□□□□□ -0.81
SNCA-212ENST00000611107 SYNE3Q6ZMZ3 975 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 HEATR3Q7Z4Q2 680 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 CYP2W1Q8TAV3 490 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 UIMC1Q96RL1 719 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 MTG1Q9BT17 334 aaPredicted RBP9.97□□□□□ -0.81
SNCA-212ENST00000611107 NOC4LQ9BVI4 516 aaKnown RBP9.97□□□□□ -0.81
SNCA-212ENST00000611107 MAF1Q9H063 256 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 RBM28Q9NW13 759 aaKnown RBP9.97□□□□□ -0.81
SNCA-212ENST00000611107 TPCN1Q9ULQ1 816 aa9.97□□□□□ -0.81
SNCA-212ENST00000611107 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 HAS3O00219 553 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 PIK3CDO00329 1044 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 NKRFO15226 690 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNCA-212ENST00000611107 GGPS1O95749 300 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 HOXD8P13378 290 aaPredicted RBP9.96□□□□□ -0.82
SNCA-212ENST00000611107 ITGB5P18084 799 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 CCND2P30279 289 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 GNAQP50148 359 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 CHMP4BP1P59074 171 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 CCT2P78371 535 aaKnown RBP9.96□□□□□ -0.82
SNCA-212ENST00000611107 SCRN1Q12765 414 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 RABEP1Q15276 862 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 TMEM240Q5SV17 173 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 CELF3Q5SZQ8 465 aaKnown RBP9.96□□□□□ -0.82
SNCA-212ENST00000611107 TRIM50Q86XT4 487 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 PHKBQ93100 1093 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 ZNF274Q96GC6 653 aaPredicted RBP9.96□□□□□ -0.82
SNCA-212ENST00000611107 AIFM3Q96NN9 605 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 INPP4AQ96PE3 977 aaPredicted RBP9.96□□□□□ -0.82
SNCA-212ENST00000611107 LBHD1Q9BQE6 289 aaPredicted RBP9.96□□□□□ -0.82
SNCA-212ENST00000611107 LZTS2Q9BRK4 669 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 C16orf70Q9BSU1 422 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 ALG1Q9BT22 464 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 PSTPIP2Q9H939 334 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 CXXC1Q9P0U4 656 aaPredicted RBP9.96□□□□□ -0.82
SNCA-212ENST00000611107 PCDHA6Q9UN73 950 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 PCDHA8Q9Y5H6 950 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 MRVI1Q9Y6F6 885 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 SIP14410 1827 aa9.96□□□□□ -0.82
SNCA-212ENST00000611107 KAT6AQ92794 2004 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 COL6A3P12111 3177 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 CABYRO75952 493 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 ICAM3P32942 547 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 CLK2P49760 499 aaKnown RBP9.95□□□□□ -0.82
SNCA-212ENST00000611107 CPT1AP50416 773 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 FPGSQ05932 587 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 STK3Q13188 491 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 ANKRD1Q15327 319 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 ME3Q16798 604 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 MFSD5Q6N075 450 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 ZNF365Q70YC5 407 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 DHX37Q8IY37 1157 aaKnown RBP9.95□□□□□ -0.82
SNCA-212ENST00000611107 SAMD3Q8N6K7 520 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 SMARCC2Q8TAQ2 1214 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 RASGRP4Q8TDF6 673 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
SNCA-212ENST00000611107 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 MAP3K20Q9NYL2 800 aaKnown RBP9.95□□□□□ -0.82
SNCA-212ENST00000611107 PKD2L1Q9P0L9 805 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 HDAC6Q9UBN7 1215 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 PRKAG2Q9UGJ0 569 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 SEC63Q9UGP8 760 aaKnown RBP9.95□□□□□ -0.82
SNCA-212ENST00000611107 UBIAD1Q9Y5Z9 338 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 LOXHD1Q8IVV2 1947 aa9.95□□□□□ -0.82
SNCA-212ENST00000611107 TCHHQ07283 1943 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 ZEB2O60315 1214 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 PFKFB2O60825 505 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 KCNA2P16389 499 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 IFNAR1P17181 557 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 PBX2P40425 430 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 PSEN2P49810 448 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 SP4Q02446 784 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 FAM47CQ5HY64 1035 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 RASIP1Q5U651 963 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 PCNX4Q63HM2 1172 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 TRAF7Q6Q0C0 670 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms