RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 FAM26FQ5R3K3 315 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 RBM26Q5T8P6 1007 aaKnown RBP11.59□□□□□ -0.55
PABPC1-224ENST00000610907 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 LRRC55Q6ZSA7 311 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 KCNK18Q7Z418 384 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 FBXO11Q86XK2 927 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 TXLNBQ8N3L3 684 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 MSANTD4Q8NCY6 345 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 ERMNQ8TAM6 284 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 C7orf43Q8WVR3 580 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 RPGRIP1Q96KN7 1286 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 KCNQ5Q9NR82 932 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 AGPAT5Q9NUQ2 364 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 HERC5Q9UII4 1024 aaKnown RBP11.59□□□□□ -0.55
PABPC1-224ENST00000610907 MYO6Q9UM54 1294 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 SIK3Q9Y2K2 1263 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 ADAMTSL1Q8N6G6 1762 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 A0A0U1RQJ8 604 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 ANO9A1A5B4 782 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 CTAGE15A4D2H0 777 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L15C9J2P7 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L13C9JLJ4 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L11C9JVI0 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L18D6R9N7 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L22D6RA61 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L17D6RBQ6 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L19D6RCP7 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L20D6RJB6 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 PLA2G4BP0C869 781 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 CTAGE8P0CG41 777 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 BMP3P12645 472 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 CIITAP33076 1130 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 HERVK_113P62684 666 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 ARHGAP4P98171 946 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L24Q0WX57 530 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 SPA17Q15506 151 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 ECM1Q16610 540 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 CCDC122Q5T0U0 273 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 SYDE2Q5VT97 1194 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 PAPD7Q5XG87 772 aaKnown RBP11.58□□□□□ -0.55
PABPC1-224ENST00000610907 CC2D1AQ6P1N0 951 aaPredicted RBP11.58□□□□□ -0.55
PABPC1-224ENST00000610907 USP17L6PQ6QN14 398 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 KIAA1328Q86T90 577 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 CTAGE6Q86UF2 777 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 CTAGE4Q8IX94 777 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 MSL3Q8N5Y2 521 aaKnown RBP11.58□□□□□ -0.55
PABPC1-224ENST00000610907 ATRIPQ8WXE1 791 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 HPS3Q969F9 1004 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 CCDC42Q96M95 316 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 RAB21Q9UL25 225 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 GUCA1BQ9UMX6 200 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 KIAA1024Q9UPX6 916 aa11.58□□□□□ -0.55
PABPC1-224ENST00000610907 ZNF646O15015 1829 aaPredicted RBP11.58□□□□□ -0.56
PABPC1-224ENST00000610907 FRMD3A2A2Y4 597 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 SPDYE3A6NKU9 549 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 PIK3CDO00329 1044 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 USO1O60763 962 aaKnown RBP11.58□□□□□ -0.56
PABPC1-224ENST00000610907 ERLIN1O75477 346 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 LCA5LO95447 670 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 NDUFB10O96000 172 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 CYP3A4P08684 503 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 RPA1P27694 616 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 SREBF1P36956 1147 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 VAV2P52735 878 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 KIF5AQ12840 1032 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 TRAPPC11Q7Z392 1133 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 ETNPPLQ8TBG4 499 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 SYN2Q92777 582 aaPredicted RBP11.58□□□□□ -0.56
PABPC1-224ENST00000610907 JAKMIP2Q96AA8 810 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 PURBQ96QR8 312 aaKnown RBP11.58□□□□□ -0.56
PABPC1-224ENST00000610907 GBP3Q9H0R5 595 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 FAM184BQ9ULE4 1060 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 PCDHA2Q9Y5H9 948 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
PABPC1-224ENST00000610907 CACNB3P54284 484 aa11.57□□□□□ -0.56
PABPC1-224ENST00000610907 EDRF1Q3B7T1 1238 aa11.57□□□□□ -0.56
PABPC1-224ENST00000610907 ZC3H3Q8IXZ2 948 aaKnown RBP11.57□□□□□ -0.56
PABPC1-224ENST00000610907 TMOD2Q9NZR1 351 aa11.57□□□□□ -0.56
PABPC1-224ENST00000610907 DNM3Q9UQ16 869 aa11.57□□□□□ -0.56
PABPC1-224ENST00000610907 SAR1BQ9Y6B6 198 aa11.57□□□□□ -0.56
PABPC1-224ENST00000610907 RGPD3A6NKT7 1758 aaPredicted RBP11.57□□□□□ -0.56
PABPC1-224ENST00000610907 RGPD4Q7Z3J3 1758 aa11.57□□□□□ -0.56
PABPC1-224ENST00000610907 ARFGEF1Q9Y6D6 1849 aa11.57□□□□□ -0.56
PABPC1-224ENST00000610907 SSU72P8A0A1W2PR75 194 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 E9PMD0 336 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 TRAF5O00463 557 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 RAD21O60216 631 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 ABL1P00519 1130 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 CYP11B2P19099 503 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 MCM3P25205 808 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 KLK7P49862 253 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 SLC12A3P55017 1021 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 CKAP4Q07065 602 aaKnown RBP11.56□□□□□ -0.56
PABPC1-224ENST00000610907 SPIRE1Q08AE8 756 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 HERC4Q5GLZ8 1057 aaPredicted RBP11.56□□□□□ -0.56
PABPC1-224ENST00000610907 GPBP1Q86WP2 473 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 SLX4Q8IY92 1834 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 SYT2Q8N9I0 419 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms