RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 FAM153AQ9UHL3 310 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 SLC12A6Q9UHW9 1150 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 USP21Q9UK80 565 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 PCDHA13Q9Y5I0 950 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 ANKRD33BA6NCL7 494 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 GCOM1H8Y6P7 765 aaPredicted RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 ZNF263O14978 683 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 HEXIM1O94992 359 aaKnown RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 LCA5LO95447 670 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 ATP6V1G2O95670 118 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 PAEPP09466 180 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 MYZAPP0CAP1 466 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 HNRNPH3P31942 346 aaKnown RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 CCNHP51946 323 aaPredicted RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 MRPS25P82663 173 aaKnown RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 CHRNDQ07001 517 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 BIRC3Q13489 604 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 BIRC2Q13490 618 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 RASGRF1Q13972 1273 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 TMTC2Q8N394 836 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 CCHCR1Q8TD31 782 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 CUL5Q93034 780 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 MOCS3O95396 460 aa13.15□□□□□ -0.3
TP53-220ENST00000610623 RIPK1Q13546 671 aa13.15□□□□□ -0.3
TP53-220ENST00000610623 ERFEQ4G0M1 354 aa13.15□□□□□ -0.3
TP53-220ENST00000610623 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
TP53-220ENST00000610623 CCT6BQ92526 530 aa13.15□□□□□ -0.3
TP53-220ENST00000610623 MTA3Q9BTC8 594 aa13.15□□□□□ -0.3
TP53-220ENST00000610623 KRT23Q9C075 422 aa13.15□□□□□ -0.3
TP53-220ENST00000610623 NOD2Q9HC29 1040 aa13.15□□□□□ -0.3
TP53-220ENST00000610623 POLD4Q9HCU8 107 aa13.15□□□□□ -0.3
TP53-220ENST00000610623 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 GNAT2P19087 354 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 GCKP35557 465 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 KRT2P35908 639 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 ELF3P78545 371 aaPredicted RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 ATP2C1P98194 919 aaPredicted RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 GUCY2DQ02846 1103 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 GKAP1Q5VSY0 366 aaPredicted RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 MSL1Q68DK7 614 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 RUFY4Q6ZNE9 571 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 MAATS1Q7Z4T9 603 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 SBF2Q86WG5 1849 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 IFT81Q8WYA0 676 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 STRBPQ96SI9 672 aaKnown RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 MTRQ99707 1265 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 HOMER3Q9NSC5 361 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 MYH13Q9UKX3 1938 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 B4DLN1 442 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 PJA2O43164 708 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 CXCR5P32302 372 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 HPDP32754 393 aaPredicted RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 SPRED3Q2MJR0 410 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 RNF10Q8N5U6 811 aaKnown RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 TATDN2Q93075 761 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 HVCN1Q96D96 273 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 TUBGCP2Q9BSJ2 902 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 RNF26Q9BY78 433 aaPredicted RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 MLXIPQ9HAP2 919 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
TP53-220ENST00000610623 PLAGL2Q9UPG8 496 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 GDAQ9Y2T3 454 aa13.14□□□□□ -0.31
TP53-220ENST00000610623 FRMD3A2A2Y4 597 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 PSMA7O14818 248 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
TP53-220ENST00000610623 ADCY2Q08462 1091 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 TLR10Q9BXR5 811 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 TRIM49BA6NDI0 452 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 BUB1BO60566 1050 aaPredicted RBP13.13□□□□□ -0.31
TP53-220ENST00000610623 GSTA1P08263 222 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 GUCY2FP51841 1108 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 INHBEP58166 350 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 KCNB1Q14721 858 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 WTAPQ15007 396 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 QPCTQ16769 361 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 AP1ARQ63HQ0 302 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 FANCBQ8NB91 859 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 SAAL1Q96ER3 474 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 TRIM47Q96LD4 638 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 PHF20Q9BVI0 1012 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 SMARCAL1Q9NZC9 954 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms