RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PIK3CDO00329 1044 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 ADAMTS3O15072 1205 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 CD4P01730 458 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 ACRP10323 421 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 PDIA3P30101 505 aaKnown RBP16.62■□□□□ 0.25
HDDC2-204ENST00000608295 FPGSQ05932 587 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 HSDL1Q3SXM5 330 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 GNPTABQ3T906 1256 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 AGXT2Q9BYV1 514 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 HIPK3Q9H422 1215 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 TANC1Q9C0D5 1861 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 NID2Q14112 1375 aa16.62■□□□□ 0.25
HDDC2-204ENST00000608295 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 A0A1W2PPC1 479 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 SLC34A2O95436 690 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 SCG2P13521 617 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 CSF2RAP15509 400 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 RCAN1P53805 252 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 AKAP17AQ02040 695 aaKnown RBP16.61■□□□□ 0.25
HDDC2-204ENST00000608295 DGKDQ16760 1214 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 CELF3Q5SZQ8 465 aaKnown RBP16.61■□□□□ 0.25
HDDC2-204ENST00000608295 JAKMIP3Q5VZ66 844 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 PCNX4Q63HM2 1172 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 CYFIP1Q7L576 1253 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 TRIM50Q86XT4 487 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 SLC43A3Q8NBI5 491 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 RASGRP4Q8TDF6 673 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 INPP4AQ96PE3 977 aaPredicted RBP16.61■□□□□ 0.25
HDDC2-204ENST00000608295 UIMC1Q96RL1 719 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 ANO3Q9BYT9 981 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 BARHL2Q9NY43 387 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 NOD1Q9Y239 953 aa16.61■□□□□ 0.25
HDDC2-204ENST00000608295 NOP56O00567 594 aaKnown RBP16.6■□□□□ 0.25
HDDC2-204ENST00000608295 FIBPO43427 364 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
HDDC2-204ENST00000608295 TIMP1P01033 207 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 LAMC2Q13753 1193 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 PFKFB3Q16875 520 aaPredicted RBP16.6■□□□□ 0.25
HDDC2-204ENST00000608295 MYSM1Q5VVJ2 828 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 PPP1R18Q6NYC8 613 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 PPTC7Q8NI37 304 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 KAT2BQ92831 832 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 SCLYQ96I15 445 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 RIC8AQ9NPQ8 531 aa16.6■□□□□ 0.25
HDDC2-204ENST00000608295 TRIP12Q14669 1992 aaPredicted RBP16.6■□□□□ 0.25
HDDC2-204ENST00000608295 CPLX1O14810 134 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 ITGB5P18084 799 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 PSEN2P49810 448 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 MFSD10Q14728 455 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 PKN1Q16512 942 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 UTP14CQ5TAP6 766 aaKnown RBP16.59■□□□□ 0.25
HDDC2-204ENST00000608295 Q7L0L9 218 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 NLRX1Q86UT6 975 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 RNPC3Q96LT9 517 aaKnown RBP16.59■□□□□ 0.25
HDDC2-204ENST00000608295 NOC4LQ9BVI4 516 aaKnown RBP16.59■□□□□ 0.25
HDDC2-204ENST00000608295 TM6SF1Q9BZW5 370 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 EHMT1Q9H9B1 1298 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 LAMA3Q16787 3333 aa16.59■□□□□ 0.25
HDDC2-204ENST00000608295 hCG_1984214I3L0E3 225 aa16.58■□□□□ 0.24
HDDC2-204ENST00000608295 KPNA6O60684 536 aa16.58■□□□□ 0.24
HDDC2-204ENST00000608295 MTMR1Q13613 665 aa16.58■□□□□ 0.24
HDDC2-204ENST00000608295 KIAA0753Q2KHM9 967 aa16.58■□□□□ 0.24
HDDC2-204ENST00000608295 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
HDDC2-204ENST00000608295 KCNV1Q6PIU1 500 aa16.58■□□□□ 0.24
HDDC2-204ENST00000608295 ZNF713Q8N859 430 aaPredicted RBP16.58■□□□□ 0.24
HDDC2-204ENST00000608295 AIFM3Q96NN9 605 aa16.58■□□□□ 0.24
HDDC2-204ENST00000608295 WNT8AQ9H1J5 351 aa16.58■□□□□ 0.24
HDDC2-204ENST00000608295 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
HDDC2-204ENST00000608295 SPATA31C2B4DYI2 1134 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 ATP9AO75110 1047 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 LGALS2P05162 132 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 AK2P54819 239 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 ZNF200P98182 395 aaPredicted RBP16.57■□□□□ 0.24
HDDC2-204ENST00000608295 NTRK3Q16288 839 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 MFSD5Q6N075 450 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 DEFB128Q7Z7B8 93 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 TMEM199Q8N511 208 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 CYP2W1Q8TAV3 490 aa16.57■□□□□ 0.24
HDDC2-204ENST00000608295 EMID1Q96A84 441 aaPredicted RBP16.57■□□□□ 0.24
HDDC2-204ENST00000608295 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.57■□□□□ 0.248e-10■■□□□ 11.4
HDDC2-204ENST00000608295 RNF26Q9BY78 433 aaPredicted RBP16.57■□□□□ 0.24
HDDC2-204ENST00000608295 DDX39AO00148 427 aaKnown RBP16.56■□□□□ 0.24
HDDC2-204ENST00000608295 PRPF3O43395 683 aaKnown RBP16.56■□□□□ 0.24
HDDC2-204ENST00000608295 STAM2O75886 525 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 LARGE1O95461 756 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 F2P00734 622 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 IFNAR1P17181 557 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 ICAM3P32942 547 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 FOSBP53539 338 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 SSRP1Q08945 709 aaKnown RBP16.56■□□□□ 0.24
HDDC2-204ENST00000608295 PTGISQ16647 500 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 NFRKBQ6P4R8 1299 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 METTL7BQ6UX53 244 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 TRIM22Q8IYM9 498 aa16.56■□□□□ 0.24
HDDC2-204ENST00000608295 REXO1Q8N1G1 1221 aaKnown RBP16.56■□□□□ 0.24
HDDC2-204ENST00000608295 FBXL16Q8N461 479 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms