RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 C7orf25Q9BPX7 421 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 ASCC2Q9H1I8 757 aaPredicted RBP24.21■■□□□ 1.47
USP6NL-204ENST00000606752 ITGB5P18084 799 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 GJA5P36382 358 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 ECM1Q16610 540 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 CHST13Q8NET6 341 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 IL31RAQ8NI17 732 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 LARP4BQ92615 738 aaKnown RBP24.21■■□□□ 1.47
USP6NL-204ENST00000606752 RAD54LQ92698 747 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 PXMP2Q9NR77 195 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 COL11A1P12107 1806 aaPredicted RBP24.2■■□□□ 1.47
USP6NL-204ENST00000606752 PSMD10O75832 226 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 EIF2AK2P19525 551 aaKnown RBP24.2■■□□□ 1.46
USP6NL-204ENST00000606752 PABPC4Q13310 644 aaKnown RBP eCLIP24.2■■□□□ 1.46
USP6NL-204ENST00000606752 SNAPC2Q13487 334 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 NCAPHQ15003 741 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 PGM5Q15124 567 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 LRCH2Q5VUJ6 765 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 ARHGEF16Q5VV41 709 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 NCAPH2Q6IBW4 605 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 OTOP1Q7RTM1 612 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 ZFP91Q96JP5 570 aaPredicted RBP24.2■■□□□ 1.46
USP6NL-204ENST00000606752 PDCD2LQ9BRP1 358 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 ZNF577Q9BSK1 485 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 TRIM9Q9C026 710 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 UBIAD1Q9Y5Z9 338 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 LOC285556D6RIA3 1793 aa24.2■■□□□ 1.46
USP6NL-204ENST00000606752 ARP10275 920 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 TPM4P67936 248 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 MRPS9P82933 396 aaKnown RBP24.19■■□□□ 1.46
USP6NL-204ENST00000606752 MYL5Q02045 173 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 KCNB1Q14721 858 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 GBA2Q9HCG7 927 aaPredicted RBP24.19■■□□□ 1.46
USP6NL-204ENST00000606752 CYP39A1Q9NYL5 469 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 BTBD7Q9P203 1132 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 RPA1P27694 616 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 ERCC5P28715 1186 aaPredicted RBP24.19■■□□□ 1.46
USP6NL-204ENST00000606752 HERVK_113P62684 666 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 MCM6Q14566 821 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 XRRA1Q6P2D8 792 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 SARM1Q6SZW1 724 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 KCNK18Q7Z418 384 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 RIOX2Q8IUF8 465 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 LRRC27Q9C0I9 530 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 A1CFQ9NQ94 594 aaKnown RBP24.19■■□□□ 1.46
USP6NL-204ENST00000606752 JADE2Q9NQC1 790 aa24.19■■□□□ 1.46
USP6NL-204ENST00000606752 OSBPP22059 807 aa24.18■■□□□ 1.46
USP6NL-204ENST00000606752 PPP2R5CQ13362 524 aa24.18■■□□□ 1.46
USP6NL-204ENST00000606752 ZNF658Q5TYW1 1059 aaPredicted RBP24.18■■□□□ 1.46
USP6NL-204ENST00000606752 GPAT2Q6NUI2 795 aa24.18■■□□□ 1.46
USP6NL-204ENST00000606752 PURBQ96QR8 312 aaKnown RBP24.18■■□□□ 1.46
USP6NL-204ENST00000606752 RIT2Q99578 217 aa24.18■■□□□ 1.46
USP6NL-204ENST00000606752 KIAA1024Q9UPX6 916 aa24.18■■□□□ 1.46
USP6NL-204ENST00000606752 DCAF8L1A6NGE4 600 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 IPO5O00410 1097 aaKnown RBP24.17■■□□□ 1.46
USP6NL-204ENST00000606752 KLRC4O43908 158 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 GAS7O60861 476 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 MED24O75448 989 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 DHX8Q14562 1220 aaKnown RBP24.17■■□□□ 1.46
USP6NL-204ENST00000606752 CATSPER3Q86XQ3 398 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 C2orf69Q8N8R5 385 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 NSUN6Q8TEA1 469 aaKnown RBP24.17■■□□□ 1.46
USP6NL-204ENST00000606752 WDR11Q9BZH6 1224 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 KCNH7Q9NS40 1196 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 FBXO40Q9UH90 709 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 KMT5BQ4FZB7 885 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 ENOX1Q8TC92 643 aaKnown RBP24.17■■□□□ 1.46
USP6NL-204ENST00000606752 CCDC47Q96A33 483 aaKnown RBP24.17■■□□□ 1.46
USP6NL-204ENST00000606752 POLR3CQ9BUI4 534 aaPredicted RBP24.17■■□□□ 1.46
USP6NL-204ENST00000606752 TRIM5Q9C035 493 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 SPATC1LQ9H0A9 340 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 NMRK2Q9NPI5 230 aa24.17■■□□□ 1.46
USP6NL-204ENST00000606752 POTEB3A0JP26 581 aa24.16■■□□□ 1.46
USP6NL-204ENST00000606752 PPP1R3GB7ZBB8 358 aa24.16■■□□□ 1.46
USP6NL-204ENST00000606752 RHOBTB3O94955 611 aa24.16■■□□□ 1.46
USP6NL-204ENST00000606752 SPATA31C1P0DKV0 1188 aa24.16■■□□□ 1.46
USP6NL-204ENST00000606752 MYCLP12524 364 aaPredicted RBP24.16■■□□□ 1.46
USP6NL-204ENST00000606752 POTEBQ6S5H4 581 aa24.16■■□□□ 1.46
USP6NL-204ENST00000606752 TRIM44Q96DX7 344 aaPredicted RBP24.16■■□□□ 1.46
USP6NL-204ENST00000606752 TEKT3Q9BXF9 490 aa24.16■■□□□ 1.46
USP6NL-204ENST00000606752 MYMKA6NI61 221 aa24.15■■□□□ 1.46
USP6NL-204ENST00000606752 EML1O00423 815 aa24.15■■□□□ 1.46
USP6NL-204ENST00000606752 CELF2O95319 508 aaKnown RBP24.15■■□□□ 1.46
USP6NL-204ENST00000606752 CD44P16070 742 aaKnown RBP24.15■■□□□ 1.46
USP6NL-204ENST00000606752 ASIC1P78348 528 aa24.15■■□□□ 1.46
USP6NL-204ENST00000606752 CNNM4Q6P4Q7 775 aa24.15■■□□□ 1.46
USP6NL-204ENST00000606752 VSIG10LQ86VR7 867 aa24.15■■□□□ 1.46
USP6NL-204ENST00000606752 KCTD17Q8N5Z5 321 aa24.15■■□□□ 1.46
USP6NL-204ENST00000606752 EIF2AK1Q9BQI3 630 aaKnown RBP24.15■■□□□ 1.46
USP6NL-204ENST00000606752 RBBP6Q7Z6E9 1792 aaKnown RBP24.15■■□□□ 1.46
USP6NL-204ENST00000606752 NR3C2P08235 984 aa24.14■■□□□ 1.46
USP6NL-204ENST00000606752 CCND2P30279 289 aa24.14■■□□□ 1.46
USP6NL-204ENST00000606752 MTMR1Q13613 665 aa24.14■■□□□ 1.46
USP6NL-204ENST00000606752 SMYD4Q8IYR2 804 aaPredicted RBP24.14■■□□□ 1.46
USP6NL-204ENST00000606752 GTPBP4Q9BZE4 634 aaKnown RBP24.14■■□□□ 1.46
USP6NL-204ENST00000606752 PEX10O60683 326 aa24.14■■□□□ 1.45
USP6NL-204ENST00000606752 CNMDO75829 334 aa24.14■■□□□ 1.45
USP6NL-204ENST00000606752 ZNF75DP51815 510 aa24.14■■□□□ 1.45
USP6NL-204ENST00000606752 B3GNT9Q6UX72 402 aa24.14■■□□□ 1.45
USP6NL-204ENST00000606752 HSD17B14Q9BPX1 270 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms