RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 LRIT3Q3SXY7 679 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 IL31RAQ8NI17 732 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 GPRASP2Q96D09 838 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 SPATA33Q96N06 139 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 SENP7Q9BQF6 1050 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
CCDC12-209ENST00000604164 ALDH8A1Q9H2A2 487 aaPredicted RBP13.24□□□□□ -0.29
CCDC12-209ENST00000604164 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 KIAA1217Q5T5P2 1943 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 ESYT2A0FGR8 921 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 SMCO2A6NFE2 343 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 SPATA31C2B4DYI2 1134 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 STXBP3O00186 592 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 NOP56O00567 594 aaKnown RBP13.23□□□□□ -0.29
CCDC12-209ENST00000604164 RGS20O76081 388 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 GGPS1O95749 300 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 IFNAR1P17181 557 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 UBA1P22314 1058 aaKnown RBP13.23□□□□□ -0.29
CCDC12-209ENST00000604164 GNA11P29992 359 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 MRPS9P82933 396 aaKnown RBP13.23□□□□□ -0.29
CCDC12-209ENST00000604164 PPIGQ13427 754 aaKnown RBP eCLIP13.23□□□□□ -0.291e-21■■□□□ 13.4
CCDC12-209ENST00000604164 NBPF20Q3BBV1 942 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 FAM47CQ5HY64 1035 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 MYSM1Q5VVJ2 828 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 MFSD5Q6N075 450 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 FAM177A1Q8N128 213 aaPredicted RBP13.23□□□□□ -0.29
CCDC12-209ENST00000604164 CCDC148Q8NFR7 591 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 BICD2Q8TD16 824 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 UPF3BQ9BZI7 483 aaKnown RBP13.23□□□□□ -0.29
CCDC12-209ENST00000604164 HIPK3Q9H422 1215 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 C6orf50Q9HD87 102 aa13.23□□□□□ -0.29
CCDC12-209ENST00000604164 GRIN2DO15399 1336 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 B4GALT4O60513 344 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 CDKL5O76039 1030 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 SLC34A2O95436 690 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 HOXD8P13378 290 aaPredicted RBP13.22□□□□□ -0.29
CCDC12-209ENST00000604164 TOB2Q14106 344 aaPredicted RBP13.22□□□□□ -0.29
CCDC12-209ENST00000604164 UBE2SQ16763 222 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 METTL7BQ6UX53 244 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 CCDC155Q8N6L0 562 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 SH3GLB2Q9NR46 395 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 RTEL1Q9NZ71 1219 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
CCDC12-209ENST00000604164 CCT2P78371 535 aaKnown RBP13.21□□□□□ -0.29
CCDC12-209ENST00000604164 SSRP1Q08945 709 aaKnown RBP13.21□□□□□ -0.29
CCDC12-209ENST00000604164 BFSP2Q13515 415 aa13.21□□□□□ -0.29
CCDC12-209ENST00000604164 MTMR1Q13613 665 aa13.21□□□□□ -0.29
CCDC12-209ENST00000604164 C7orf31Q8N865 590 aa13.21□□□□□ -0.29
CCDC12-209ENST00000604164 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.29
CCDC12-209ENST00000604164 ZMYND12Q9H0C1 365 aa13.21□□□□□ -0.29
CCDC12-209ENST00000604164 TRPV6Q9H1D0 765 aa13.21□□□□□ -0.29
CCDC12-209ENST00000604164 MTIF3Q9H2K0 278 aaKnown RBP13.21□□□□□ -0.29
CCDC12-209ENST00000604164 LTBP2Q14767 1821 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 DNAH12Q6ZR08 3092 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 F2P00734 622 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 MFSD10Q14728 455 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 NTRK3Q16288 839 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 HSDL1Q3SXM5 330 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
CCDC12-209ENST00000604164 REXO1Q8N1G1 1221 aaKnown RBP13.2□□□□□ -0.3
CCDC12-209ENST00000604164 RETREG2Q8NC44 543 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 IL17RAQ96F46 866 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 SLKQ9H2G2 1235 aaPredicted RBP13.2□□□□□ -0.3
CCDC12-209ENST00000604164 JADE2Q9NQC1 790 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 ZNF215Q9UL58 517 aaPredicted RBP13.2□□□□□ -0.3
CCDC12-209ENST00000604164 UBIAD1Q9Y5Z9 338 aa13.2□□□□□ -0.3
CCDC12-209ENST00000604164 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 DEXIO95424 95 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 PFKMP08237 780 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 XBP1P17861 261 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 ITGB8P26012 769 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 ZNF76P36508 570 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 SREBF1P36956 1147 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
CCDC12-209ENST00000604164 PSEN2P49810 448 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 SP2Q02086 613 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 PKN1Q16512 942 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 PTGISQ16647 500 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 KIAA0753Q2KHM9 967 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 PSRC1Q6PGN9 363 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-209ENST00000604164 CYFIP1Q7L576 1253 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 NIPA1Q7RTP0 329 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 KAT2BQ92831 832 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 PHKBQ93100 1093 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-209ENST00000604164 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
CCDC12-209ENST00000604164 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 NOC4LQ9BVI4 516 aaKnown RBP13.19□□□□□ -0.3
CCDC12-209ENST00000604164 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
CCDC12-209ENST00000604164 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
CCDC12-209ENST00000604164 TRMT13Q9NUP7 481 aaKnown RBP13.19□□□□□ -0.3
CCDC12-209ENST00000604164 SCN10AQ9Y5Y9 1956 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms