RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 CCDC194A0A1B0GVG4 234 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 N4BP3O15049 544 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 YEATS4O95619 227 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 EGFRP00533 1210 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 TBX2Q13207 712 aaPredicted RBP16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 CFAP58Q5T655 872 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 TMTC3Q6ZXV5 915 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 JAKMIP2Q96AA8 810 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 GRIN2DO15399 1336 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 KRT2P35908 639 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 CKAP4Q07065 602 aaKnown RBP16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 TMOD2Q9NZR1 351 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 DACH1Q9UI36 760 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 FAM184BQ9ULE4 1060 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 ATP1A1P05023 1023 aaKnown RBP16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 INHBEP58166 350 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 FUKQ8N0W3 1084 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 TMEM260Q9NX78 707 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 MACROD2A1Z1Q3 448 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 UPP2O95045 317 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 GH2P01242 217 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 SCG2P13521 617 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 TNNI2P48788 182 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 PKN1Q16512 942 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 CERKLQ49MI3 558 aaPredicted RBP16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 NIM1KQ8IY84 436 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 FBXO41Q8TF61 875 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 PANX2Q96RD6 677 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 FAM167BQ9BTA0 163 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 VPS16Q9H269 839 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 KCNH3Q9ULD8 1083 aa16.93■□□□□ 0.3
PPFIA3-206ENST00000602655 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 PP2D1A8MPX8 630 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 CYTH3O43739 400 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 DGKZQ13574 1117 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 UBE2SQ16763 222 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 SOGA3Q5TF21 947 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 NLRP14Q86W24 1093 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 ZNF287Q9HBT7 754 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 KRT9P35527 623 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 WLSQ5T9L3 541 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 ARHGAP27Q6ZUM4 889 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 CNGA4Q8IV77 575 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 STAMBPL1Q96FJ0 436 aa16.92■□□□□ 0.3
PPFIA3-206ENST00000602655 GRIK3Q13003 919 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 NLGN2Q8NFZ4 835 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 EPN3Q9H201 632 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 BLZF1Q9H2G9 400 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 ASTN2O75129 1339 aaPredicted RBP16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 IRS2Q9Y4H2 1338 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 GOLGA6L10A6NI86 522 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 TRIM75PA6NK02 468 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 IDEP14735 1019 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 DACT2Q5SW24 774 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 SPAG5Q96R06 1193 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 NAA15Q9BXJ9 866 aaKnown RBP16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 PIM2Q9P1W9 311 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 RANBP1P43487 201 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 UBXN2AP68543 259 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 TRAF1Q13077 416 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 PTGDRQ13258 359 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 TMTC1Q8IUR5 882 aa16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 FOXP4Q8IVH2 680 aaPredicted RBP16.91■□□□□ 0.3
PPFIA3-206ENST00000602655 RASSF9O75901 435 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 SLC1A4P43007 532 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 FXR1P51114 621 aaKnown RBP eCLIP16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 GUCY2FP51841 1108 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 IQCEQ6IPM2 695 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 SMYD4Q8IYR2 804 aaPredicted RBP16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 EHBP1Q8NDI1 1231 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 CSRNP2Q9H175 543 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 ANAPC4Q9UJX5 808 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 L3MBTL1Q9Y468 752 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 WNK3Q9BYP7 1800 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 RTN2O75298 545 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 CPLX4Q7Z7G2 160 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 SMCO2A6NFE2 343 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 A6NNZ2 444 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 PPP1R37O75864 691 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 TUBB8Q3ZCM7 444 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 DALRD3Q5D0E6 543 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 SHC4Q6S5L8 630 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 HDAC7Q8WUI4 952 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 ITFG2Q969R8 447 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 CCDC43Q96MW1 224 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 POLR3EQ9NVU0 708 aa16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 CICQ96RK0 1608 aaPredicted RBP16.9■□□□□ 0.3
PPFIA3-206ENST00000602655 ORC4O43929 436 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 NR1D1P20393 614 aa16.89■□□□□ 0.29
PPFIA3-206ENST00000602655 ECE1P42892 770 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms