RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	MYB	P10242	640 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	LRRC63	Q05C16	580 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	SLC9C1	Q4G0N8	1177 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	RNF187	Q5TA31	235 aa	Predicted RBP	18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	MEI1	Q5TIA1	1274 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	C6orf89	Q6UWU4	347 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	LRRC55	Q6ZSA7	311 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	KRT25	Q7Z3Z0	450 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	CALML4	Q96GE6	196 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	KIAA1551	Q9HCM1	1747 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	MYMK	A6NI61	221 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	FTCD	O95954	541 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	SMTN	P53814	917 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	TRADD	Q15628	312 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	CEP85L	Q5SZL2	805 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	RPAIN	Q86UA6	219 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	SYN2	Q92777	582 aa	Predicted RBP	18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	BSDC1	Q9NW68	430 aa	Predicted RBP	18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	SERPING1	P05155	500 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	KLRK1	P26718	216 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	LRIG3	Q6UXM1	1119 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	MAATS1	Q7Z4T9	603 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	ZMYND12	Q9H0C1	365 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	NUCKS1	Q9H1E3	243 aa	Known RBP	18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	LUC7L	Q9NQ29	371 aa	Known RBP	18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	PLCB1	Q9NQ66	1216 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	BLOC1S4	Q9NUP1	217 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	PCDHGC5	Q9Y5F6	944 aa		18.29	■□□□□ 0.52
CAPN12-211	ENST00000601685	SCN7A	Q01118	1682 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	LAMB2	P55268	1798 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	RAD51C	O43502	376 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	TLR2	O60603	784 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	ZPR1	O75312	459 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	DNA2	P51530	1060 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	IFT88	Q13099	833 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	DRP2	Q13474	957 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	NONO	Q15233	471 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	SLC4A8	Q2Y0W8	1093 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	ARFGAP2	Q8N6H7	521 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	JPH2	Q9BR39	696 aa	Predicted RBP	18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	CEP72	Q9P209	647 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685		E7EVH7	732 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	CHUK	O15111	745 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	KLRC1	P26715	233 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	TNNC1	P63316	161 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	GRB10	Q13322	594 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	SFMBT2	Q5VUG0	894 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	CCDC13	Q8IYE1	715 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	EIF1AD	Q8N9N8	165 aa	Known RBP	18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	CELF1	Q92879	486 aa	Known RBP	18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	NLRC4	Q9NPP4	1024 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	ZNF652	Q9Y2D9	606 aa		18.28	■□□□□ 0.52
CAPN12-211	ENST00000601685	COL14A1	Q05707	1796 aa	Known RBP	18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	RASSF9	O75901	435 aa		18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	CCDC40	Q4G0X9	1142 aa		18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	NEK8	Q86SG6	692 aa		18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	USP38	Q8NB14	1042 aa		18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	KLC4	Q9NSK0	619 aa		18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	STK17A	Q9UEE5	414 aa		18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	TMEM59L	Q9UK28	342 aa		18.27	■□□□□ 0.52
CAPN12-211	ENST00000601685	DDB1	Q16531	1140 aa		18.27	■□□□□ 0.51
CAPN12-211	ENST00000601685	TANGO6	Q9C0B7	1094 aa		18.27	■□□□□ 0.51
CAPN12-211	ENST00000601685	ISCU	Q9H1K1	167 aa		18.27	■□□□□ 0.51
CAPN12-211	ENST00000601685	GOLGA6L10	A6NI86	522 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	NOL4	O94818	638 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	PRDX5	P30044	214 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	EHHADH	Q08426	723 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	FAM83B	Q5T0W9	1011 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	FOXR2	Q6PJQ5	311 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	DYM	Q7RTS9	669 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	C3orf20	Q8ND61	904 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	CYFIP2	Q96F07	1278 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	PNMA5	Q96PV4	448 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	CD248	Q9HCU0	757 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	MCM9	Q9NXL9	1143 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	PALM3	A6NDB9	673 aa	Predicted RBP	18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	USP17L8	P0C7I0	530 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	ERCC3	P19447	782 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	HOXA7	P31268	230 aa	Predicted RBP	18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	NT5C2	P49902	561 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	SF3B3	Q15393	1217 aa	Known RBP	18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	TSG101	Q99816	390 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685	ATP6V0A2	Q9Y487	856 aa		18.26	■□□□□ 0.51
CAPN12-211	ENST00000601685		H0YGN5	161 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	CCDC172	P0C7W6	258 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	HPD	P32754	393 aa	Predicted RBP	18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	HSD17B3	P37058	310 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	NAPA	P54920	295 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	RNASE9	P60153	205 aa	Known RBP	18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	SLC18A3	Q16572	532 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	BICDL1	Q6ZP65	573 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	FBXO33	Q7Z6M2	555 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	KLHL7	Q8IXQ5	586 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	LARP4B	Q92615	738 aa	Known RBP	18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	TACO1	Q9BSH4	297 aa	Known RBP	18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	RIC8A	Q9NPQ8	531 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms