RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 EMID1Q96A84 441 aaPredicted RBP18.8■□□□□ 0.6
SSBP4-211ENST00000601614 UBA5Q9GZZ9 404 aa18.8■□□□□ 0.6
SSBP4-211ENST00000601614 PRKAG3Q9UGI9 489 aa18.8■□□□□ 0.6
SSBP4-211ENST00000601614 CTNNA3Q9UI47 895 aa18.8■□□□□ 0.6
SSBP4-211ENST00000601614 HOXD8P13378 290 aaPredicted RBP18.79■□□□□ 0.6
SSBP4-211ENST00000601614 ADHFE1Q8IWW8 467 aa18.79■□□□□ 0.6
SSBP4-211ENST00000601614 NSUN6Q8TEA1 469 aaKnown RBP18.79■□□□□ 0.6
SSBP4-211ENST00000601614 KATNAL1Q9BW62 490 aa18.79■□□□□ 0.6
SSBP4-211ENST00000601614 DOCK5Q9H7D0 1870 aa18.79■□□□□ 0.6
SSBP4-211ENST00000601614 SORBS3O60504 671 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 FGAP02671 866 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 DLX2Q07687 328 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-211ENST00000601614 ALX1Q15699 326 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 STXBP2Q15833 593 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 RPAINQ86UA6 219 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 FBXO11Q86XK2 927 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 TMEM192Q8IY95 271 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 PPTC7Q8NI37 304 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 SAMD11Q96NU1 681 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 RMDN3Q96TC7 470 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 NSUN3Q9H649 340 aaKnown RBP18.78■□□□□ 0.6
SSBP4-211ENST00000601614 CLDND1Q9NY35 253 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 MUTYHQ9UIF7 546 aa18.78■□□□□ 0.6
SSBP4-211ENST00000601614 EMSYQ7Z589 1322 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-211ENST00000601614 RSPH10B2B2RC85 870 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 UPP2O95045 317 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 RSPH10BP0C881 870 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 EIF2AK2P19525 551 aaKnown RBP18.77■□□□□ 0.6
SSBP4-211ENST00000601614 THPOP40225 353 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 CDC37Q16543 378 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-211ENST00000601614 SERINC5Q86VE9 423 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 TOP1MTQ969P6 601 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 IWS1Q96ST2 819 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 YME1L1Q96TA2 773 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 MRVI1Q9Y6F6 885 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 KMT2EQ8IZD2 1858 aa18.77■□□□□ 0.6
SSBP4-211ENST00000601614 RGS20O76081 388 aa18.76■□□□□ 0.59
SSBP4-211ENST00000601614 LINC00271P0C7V0 271 aa18.76■□□□□ 0.59
SSBP4-211ENST00000601614 HAND2P61296 217 aa18.76■□□□□ 0.59
SSBP4-211ENST00000601614 LAMC2Q13753 1193 aa18.76■□□□□ 0.59
SSBP4-211ENST00000601614 CLUL1Q15846 466 aa18.76■□□□□ 0.59
SSBP4-211ENST00000601614 CTC1Q2NKJ3 1217 aa18.76■□□□□ 0.59
SSBP4-211ENST00000601614 HSDL1Q3SXM5 330 aa18.76■□□□□ 0.59
SSBP4-211ENST00000601614 DHX37Q8IY37 1157 aaKnown RBP18.76■□□□□ 0.59
SSBP4-211ENST00000601614 PRSS33Q8NF86 280 aa18.76■□□□□ 0.59
SSBP4-211ENST00000601614 ABCB11O95342 1321 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 NR3C2P08235 984 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 SMAD2Q15796 467 aaKnown RBP18.75■□□□□ 0.59
SSBP4-211ENST00000601614 MYSM1Q5VVJ2 828 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 TTC14Q96N46 770 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 C16orf70Q9BSU1 422 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 PXMP2Q9NR77 195 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 FAM50BQ9Y247 325 aa18.75■□□□□ 0.59
SSBP4-211ENST00000601614 SALL3Q9BXA9 1300 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 KIAA1671Q9BY89 1806 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 A0A0D9SFI3 127 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 OPLAHO14841 1288 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 MBTPS2O43462 519 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 EIF3JO75822 258 aaKnown RBP18.74■□□□□ 0.59
SSBP4-211ENST00000601614 HOXC8P31273 242 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 GTF2F1P35269 517 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■■■□ 26.2
SSBP4-211ENST00000601614 HYAL1Q12794 435 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 HERC4Q5GLZ8 1057 aaPredicted RBP18.74■□□□□ 0.59
SSBP4-211ENST00000601614 GPATCH4Q5T3I0 446 aaKnown RBP18.74■□□□□ 0.59
SSBP4-211ENST00000601614 IER5LQ5T953 404 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 ARHGEF16Q5VV41 709 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 ADGRF4Q8IZF3 695 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 MIER1Q8N108 512 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 FAM227BQ96M60 508 aa18.74■□□□□ 0.59
SSBP4-211ENST00000601614 USP34Q70CQ2 3546 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 ZDBF2Q9HCK1 2354 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 LAMA4Q16363 1823 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 TREHO43280 583 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 TBX10O75333 385 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 PPFIA4O75335 1185 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 CTSHP09668 335 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 MX1P20591 662 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 SP2Q02086 613 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 QRICH1Q2TAL8 776 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 RNF135Q8IUD6 432 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 MAF1Q9H063 256 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 NEDD4P46934 1319 aa18.73■□□□□ 0.59
SSBP4-211ENST00000601614 GRM6O15303 877 aa18.72■□□□□ 0.59
SSBP4-211ENST00000601614 LINC01565O15544 149 aa18.72■□□□□ 0.59
SSBP4-211ENST00000601614 CELF3Q5SZQ8 465 aaKnown RBP18.72■□□□□ 0.59
SSBP4-211ENST00000601614 ZNF589Q86UQ0 364 aaPredicted RBP18.72■□□□□ 0.59
SSBP4-211ENST00000601614 SEPT8Q92599 483 aa18.72■□□□□ 0.59
SSBP4-211ENST00000601614 GPKOWQ92917 476 aaPredicted RBP eCLIP18.72■□□□□ 0.59
SSBP4-211ENST00000601614 ATP6V0A1Q93050 837 aa18.72■□□□□ 0.59
SSBP4-211ENST00000601614 MFSD14AQ96MC6 490 aa18.72■□□□□ 0.59
SSBP4-211ENST00000601614 SPATA33Q96N06 139 aa18.72■□□□□ 0.59
SSBP4-211ENST00000601614 IFIH1Q9BYX4 1025 aaKnown RBP18.72■□□□□ 0.59
SSBP4-211ENST00000601614 UPF3BQ9BZI7 483 aaKnown RBP18.72■□□□□ 0.59
SSBP4-211ENST00000601614 BCAS3Q9H6U6 928 aa18.72■□□□□ 0.59
SSBP4-211ENST00000601614 RCAN3Q9UKA8 241 aa18.72■□□□□ 0.59
SSBP4-211ENST00000601614 KAT6AQ92794 2004 aa18.71■□□□□ 0.59
SSBP4-211ENST00000601614 C17orf102A2RUQ5 167 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms