RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 ZNF318Q5VUA4 2279 aa11.68□□□□□ -0.54
HIF3A-219ENST00000600879 CFAP54Q96N23 3096 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 TMEM221A6NGB7 291 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 H3BNC9 293 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 M0R296 226 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 ST18O60284 1047 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 TBX10O75333 385 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 EIF2AK2P19525 551 aaKnown RBP11.67□□□□□ -0.54
HIF3A-219ENST00000600879 HTRA4P83105 476 aaPredicted RBP11.67□□□□□ -0.54
HIF3A-219ENST00000600879 ZNF543Q08ER8 600 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 HYAL1Q12794 435 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 MKRN4PQ13434 485 aaPredicted RBP11.67□□□□□ -0.54
HIF3A-219ENST00000600879 HERC4Q5GLZ8 1057 aaPredicted RBP11.67□□□□□ -0.54
HIF3A-219ENST00000600879 FBXO11Q86XK2 927 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
HIF3A-219ENST00000600879 PBXIP1Q96AQ6 731 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 PRKAG3Q9UGI9 489 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
HIF3A-219ENST00000600879 WDR19Q8NEZ3 1342 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 RSPH10B2B2RC85 870 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 STXBP3O00186 592 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 GRM6O15303 877 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 MBTPS2O43462 519 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 ORC4O43929 436 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 F2P00734 622 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 NEFLP07196 543 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 CTSHP09668 335 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 RSPH10BP0C881 870 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 PTPN5P54829 565 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 VCPP55072 806 aaKnown RBP11.66□□□□□ -0.54
HIF3A-219ENST00000600879 HAND2P61296 217 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 COL19A1Q14993 1142 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 STXBP2Q15833 593 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 PI4K2BQ8TCG2 481 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 SYTL5Q8TDW5 730 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-219ENST00000600879 EDAQ92838 391 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 RMDN3Q96TC7 470 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 KATNAL1Q9BW62 490 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 UPF3BQ9BZI7 483 aaKnown RBP11.66□□□□□ -0.54
HIF3A-219ENST00000600879 CHMP4BQ9H444 224 aaKnown RBP11.66□□□□□ -0.54
HIF3A-219ENST00000600879 DDX41Q9UJV9 622 aaKnown RBP11.66□□□□□ -0.54
HIF3A-219ENST00000600879 FAM50BQ9Y247 325 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 MRVI1Q9Y6F6 885 aa11.66□□□□□ -0.54
HIF3A-219ENST00000600879 HAS3O00219 553 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 CTNNB1P35222 781 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 SMAD2Q15796 467 aaKnown RBP11.65□□□□□ -0.54
HIF3A-219ENST00000600879 CDC37Q16543 378 aaPredicted RBP11.65□□□□□ -0.54
HIF3A-219ENST00000600879 ARHGEF16Q5VV41 709 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 TRIM67Q6ZTA4 783 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 NSUN6Q8TEA1 469 aaKnown RBP11.65□□□□□ -0.54
HIF3A-219ENST00000600879 ZFP91Q96JP5 570 aaPredicted RBP11.65□□□□□ -0.54
HIF3A-219ENST00000600879 ZKSCAN3Q9BRR0 538 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 ALG13Q9NP73 1137 aaKnown RBP11.65□□□□□ -0.54
HIF3A-219ENST00000600879 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 PNMA2Q9UL42 364 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 TECTAO75443 2155 aa11.65□□□□□ -0.54
HIF3A-219ENST00000600879 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-219ENST00000600879 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
HIF3A-219ENST00000600879 PLEKHG4Q58EX7 1191 aa11.64□□□□□ -0.55
HIF3A-219ENST00000600879 SAMD11Q96NU1 681 aa11.64□□□□□ -0.55
HIF3A-219ENST00000600879 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
HIF3A-219ENST00000600879 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 EMSYQ7Z589 1322 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
HIF3A-219ENST00000600879 RGS20O76081 388 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 FGRP09769 529 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 SNHG28P0DPA3 235 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 MYCLP12524 364 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-219ENST00000600879 CTC1Q2NKJ3 1217 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 HSDL1Q3SXM5 330 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 SERINC5Q86VE9 423 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 SUGP1Q8IWZ8 645 aaKnown RBP11.63□□□□□ -0.55
HIF3A-219ENST00000600879 RGS22Q8NE09 1264 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 PPTC7Q8NI37 304 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 EXOC6Q8TAG9 804 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 SEPT8Q92599 483 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 ATP6V0A1Q93050 837 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 TOP1MTQ969P6 601 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 SPATA33Q96N06 139 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 VAT1LQ9HCJ6 419 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 TCP11L1Q9NUJ3 509 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 PCDHGC5Q9Y5F6 944 aa11.63□□□□□ -0.55
HIF3A-219ENST00000600879 ABCB11O95342 1321 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 MICAL3Q7RTP6 2002 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 MYO7AQ13402 2215 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 ZFHX2Q9C0A1 2572 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-219ENST00000600879 C17orf102A2RUQ5 167 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 H0Y858 1186 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 TREHO43280 583 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 EIF3JO75822 258 aaKnown RBP11.62□□□□□ -0.55
HIF3A-219ENST00000600879 GGPS1O95749 300 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 CFBP00751 764 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 PDGFBP01127 241 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-219ENST00000600879 FGAP02671 866 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 NR3C2P08235 984 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 LINC00271P0C7V0 271 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
HIF3A-219ENST00000600879 ADGRD2Q7Z7M1 963 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 ADGRF4Q8IZF3 695 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms