RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 SPRED3Q2MJR0 410 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 NBPF5PQ86XG9 351 aaPredicted RBP21.3■■□□□ 1
ARHGEF1-218ENST00000599589 N4BP2L2Q92802 583 aaPredicted RBP21.3■■□□□ 1
ARHGEF1-218ENST00000599589 CELF1Q92879 486 aaKnown RBP21.3■■□□□ 1
ARHGEF1-218ENST00000599589 RNF14Q9UBS8 474 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 SCN7AQ01118 1682 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 CCDC194A0A1B0GVG4 234 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 PALMO75781 387 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 CLSTN1O94985 981 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 SSBP05455 408 aaKnown RBP eCLIP21.3■■□□□ 1
ARHGEF1-218ENST00000599589 PDHBP11177 359 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 DRP2Q13474 957 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 ASTE1Q2TB18 679 aaPredicted RBP21.3■■□□□ 1
ARHGEF1-218ENST00000599589 FAM47AQ5JRC9 791 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 C1orf131Q8NDD1 294 aaKnown RBP21.3■■□□□ 1
ARHGEF1-218ENST00000599589 PCDHA4Q9UN74 947 aa21.3■■□□□ 1
ARHGEF1-218ENST00000599589 PACSIN2Q9UNF0 486 aaPredicted RBP21.3■■□□□ 1
ARHGEF1-218ENST00000599589 INF2Q27J81 1249 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 WLSQ5T9L3 541 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 TPTE2Q6XPS3 522 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 RNF10Q8N5U6 811 aaKnown RBP21.29■■□□□ 1
ARHGEF1-218ENST00000599589 BAP1Q92560 729 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 DDX20Q9UHI6 824 aaKnown RBP21.29■■□□□ 1
ARHGEF1-218ENST00000599589 ODF2LQ9ULJ1 636 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 GOLGA6L10A6NI86 522 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 CABP7Q86V35 215 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 CEP57Q86XR8 500 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 KIAA0895Q8NCT3 520 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 OR2W6PQ8NHA6 318 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 RIOK1Q9BRS2 568 aaKnown RBP21.29■■□□□ 1
ARHGEF1-218ENST00000599589 SLC39A2Q9NP94 309 aa21.29■■□□□ 1
ARHGEF1-218ENST00000599589 RAD51CO43502 376 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 HSPA9P38646 679 aaKnown RBP21.28■■□□□ 1
ARHGEF1-218ENST00000599589 RPS8P62241 208 aaKnown RBP21.28■■□□□ 1
ARHGEF1-218ENST00000599589 SNCBQ16143 134 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 TDRD12Q587J7 1177 aaKnown RBP21.28■■□□□ 1
ARHGEF1-218ENST00000599589 FAM182BQ5T319 152 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 FAM212AQ96EL1 285 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 OSBPL7Q9BZF2 842 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 FLT1P17948 1338 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 BTAF1O14981 1849 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 GOLGA6L7A0A1B0GV03 622 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 GMNCA6NCL1 334 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 SRRM3A6NNA2 597 aaPredicted RBP21.28■■□□□ 1
ARHGEF1-218ENST00000599589 DNM1LO00429 736 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 CDC37Q16543 378 aaPredicted RBP21.28■■□□□ 1
ARHGEF1-218ENST00000599589 QPCTQ16769 361 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 CYB5D1Q6P9G0 228 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 KLHL7Q8IXQ5 586 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 PARP9Q8IXQ6 854 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 ACTR5Q9H9F9 607 aaPredicted RBP21.28■■□□□ 1
ARHGEF1-218ENST00000599589 THSD7AQ9UPZ6 1657 aa21.28■■□□□ 1
ARHGEF1-218ENST00000599589 PDXDC1Q6P996 788 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 WTIPA6NIX2 430 aaPredicted RBP21.27■■□□□ 1
ARHGEF1-218ENST00000599589 TXNRD1Q16881 649 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 HGSNATQ68CP4 663 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 CACNA2D4Q7Z3S7 1137 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 FAM228AQ86W67 206 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 FUKQ8N0W3 1084 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 ARFGAP2Q8N6H7 521 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 FAM84BQ96KN1 310 aaPredicted RBP21.27■■□□□ 1
ARHGEF1-218ENST00000599589 C7orf25Q9BPX7 421 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 HAUS2Q9NVX0 235 aa21.27■■□□□ 1
ARHGEF1-218ENST00000599589 NHSQ6T4R5 1651 aa21.27■□□□□ 0.99
ARHGEF1-218ENST00000599589 GCOM1H8Y6P7 765 aaPredicted RBP21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 MYZAPP0CAP1 466 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 HSD17B3P37058 310 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 HLTFQ14527 1009 aaKnown RBP eCLIP21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 MAN2A1Q16706 1144 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 CCDC84Q86UT8 332 aaPredicted RBP21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 ARHGEF1Q92888 912 aaKnown RBP21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 PLCB1Q9NQ66 1216 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 PCDHA6Q9UN73 950 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 PCDHA8Q9Y5H6 950 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 GRID2IPA4D2P6 1211 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 USP17L12C9JPN9 530 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 USP17L21D6R901 530 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 BACH1O14867 736 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 FGRP09769 529 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 TMOD1P28289 359 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 GJD4Q96KN9 370 aaPredicted RBP21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 CUEDC2Q9H467 287 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 VEZTQ9HBM0 779 aa21.26■□□□□ 0.99
ARHGEF1-218ENST00000599589 EHHADHQ08426 723 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 ANKRD20A8PQ5CZ79 823 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 CENPPQ6IPU0 288 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 CNNM4Q6P4Q7 775 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 SCLT1Q96NL6 688 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 TAF1DQ9H5J8 278 aaPredicted RBP21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 MAGEF1Q9HAY2 307 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 TCP11L1Q9NUJ3 509 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 M0R2N6 131 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 PPP1R2P41236 205 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 MIEF2Q96C03 454 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 INPP4AQ96PE3 977 aaPredicted RBP21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 BRIP1Q9BX63 1249 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 ANKRD2Q9GZV1 360 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 NLRC4Q9NPP4 1024 aa21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 BCCIPQ9P287 314 aaKnown RBP eCLIP21.25■□□□□ 0.99
ARHGEF1-218ENST00000599589 SLC12A6Q9UHW9 1150 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms