RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 GH1P01241 217 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 TFRCP02786 760 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 TRAPPC10P48553 1259 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 NR5A1Q13285 461 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 ORC2Q13416 577 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 PIK3AP1Q6ZUJ8 805 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 TLK2Q86UE8 772 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 NOSTRINQ8IVI9 506 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 PCSK9Q8NBP7 692 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 OXER1Q8TDS5 423 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 TSEN34Q9BSV6 310 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 RTEL1Q9NZ71 1219 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 DDX49Q9Y6V7 483 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 CCDC85CA6NKD9 419 aa18.82■□□□□ 0.6
SHKBP1-219ENST00000599575 DNM1LO00429 736 aa18.82■□□□□ 0.6
SHKBP1-219ENST00000599575 ZEB2O60315 1214 aa18.82■□□□□ 0.6
SHKBP1-219ENST00000599575 ADAMTS4O75173 837 aa18.82■□□□□ 0.6
SHKBP1-219ENST00000599575 CPT1AP50416 773 aa18.82■□□□□ 0.6
SHKBP1-219ENST00000599575 Q4G0T1 1027 aa18.82■□□□□ 0.6
SHKBP1-219ENST00000599575 MBOAT7Q96N66 472 aa18.82■□□□□ 0.6
SHKBP1-219ENST00000599575 KCNH7Q9NS40 1196 aa18.82■□□□□ 0.6
SHKBP1-219ENST00000599575 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 IGLV3-22A0A075B6J6 115 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 A6NJR5 290 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 FAM86B1E9PN63 330 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 KPNA6O60684 536 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 FAM86B2P0C5J1 330 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 GUCY1B3Q02153 619 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 INF2Q27J81 1249 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 METTL7BQ6UX53 244 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 DHX37Q8IY37 1157 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 TBC1D22BQ9NU19 505 aa18.81■□□□□ 0.6
SHKBP1-219ENST00000599575 NFASCO94856 1347 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 MOXD2PA6NHM9 499 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 KBTBD13C9JR72 458 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 DYNC1LI2O43237 492 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 ADCY6O43306 1168 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 ARIH2O95376 493 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 SYT1P21579 422 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 UBA1P22314 1058 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 LY6KQ17RY6 165 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 CELF3Q5SZQ8 465 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 MYSM1Q5VVJ2 828 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 BRAPQ7Z569 592 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 PLA2G4DQ86XP0 818 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 KLHDC9Q8NEP7 349 aa18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 NOL7Q9UMY1 257 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-219ENST00000599575 TBX3O15119 743 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 CABYRO75952 493 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 C6orf222P0C671 652 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 FOSBP53539 338 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 ARHGAP1Q07960 439 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 SEMA3FQ13275 785 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 LRRC41Q15345 812 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 FSCN1Q16658 493 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 LETM2Q2VYF4 491 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 PRR16Q569H4 304 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 OR6J1Q8NGC5 347 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 PPTC7Q8NI37 304 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 SDF4Q9BRK5 362 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 SEZ6LQ9BYH1 1024 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 MLXIPQ9HAP2 919 aa18.79■□□□□ 0.6
SHKBP1-219ENST00000599575 IPO5O00410 1097 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 PPFIA4O75335 1185 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 GGPS1O95749 300 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 PGK1P00558 417 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 KCNA2P16389 499 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 RILPL1Q5EBL4 403 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 GNASQ5JWF2 1037 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 MCTP1Q6DN14 999 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 CYP2W1Q8TAV3 490 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 LENG9Q96B70 501 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 FAM20AQ96MK3 541 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 RIT2Q99578 217 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 AGO4Q9HCK5 861 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 POLR3EQ9NVU0 708 aa18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 DDX25Q9UHL0 483 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-219ENST00000599575 MCM3APO60318 1980 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 POTEFA5A3E0 1075 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 STX6O43752 255 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 EDIL3O43854 480 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 CCNT1O60563 726 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 HOXD8P13378 290 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 ANP32AP39687 249 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 SP2Q02086 613 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 EARS2Q5JPH6 523 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 ANO1Q5XXA6 986 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 ZNF577Q9BSK1 485 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 ZSCAN16Q9H4T2 348 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 TCEAL9Q9UHQ7 104 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 PHF24Q9UPV7 400 aa18.77■□□□□ 0.6
SHKBP1-219ENST00000599575 VPS37CA5D8V6 355 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-219ENST00000599575 NOP56O00567 594 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-219ENST00000599575 CTAGE5O15320 804 aa18.76■□□□□ 0.59
SHKBP1-219ENST00000599575 FARP2O94887 1054 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-219ENST00000599575 ARP10275 920 aa18.76■□□□□ 0.59
SHKBP1-219ENST00000599575 DGKDQ16760 1214 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms