RNA–Protein interactions for RNA: ENST00000599019.5

PRKD2-212, Transcript of protein kinase D2, humanhuman

TSL 5

Gene PRKD2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-212ENST00000599019 SLF1Q9BQI6 1058 aa23.64■■□□□ 1.37
PRKD2-212ENST00000599019 SPDYE4A6NLX3 237 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 EIF3CLB5ME19 914 aaKnown RBP23.63■■□□□ 1.37
PRKD2-212ENST00000599019 IDEP14735 1019 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 DYMQ7RTS9 669 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 FBXO11Q86XK2 927 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 SLC35F6Q8N357 371 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 CRYGNQ8WXF5 182 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 DNAJC19Q96DA6 116 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 EIF3CQ99613 913 aaKnown RBP23.63■■□□□ 1.37
PRKD2-212ENST00000599019 CHP1Q99653 195 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 KCNQ5Q9NR82 932 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 PITPNM2Q9BZ72 1349 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 MYH7BA7E2Y1 1941 aa23.63■■□□□ 1.37
PRKD2-212ENST00000599019 GNA14O95837 355 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 TUBBP07437 444 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 SYDE2Q5VT97 1194 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 WDR59Q6PJI9 974 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 SIAH1Q8IUQ4 282 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 PCMTD1Q96MG8 357 aaPredicted RBP23.62■■□□□ 1.37
PRKD2-212ENST00000599019 CEP63Q96MT8 703 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 NUDT12Q9BQG2 462 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 TMOD2Q9NZR1 351 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 SLX4Q8IY92 1834 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 GABPB1Q06547 395 aaPredicted RBP23.62■■□□□ 1.37
PRKD2-212ENST00000599019 COASYQ13057 564 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 FAM20AQ96MK3 541 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 IRX2Q9BZI1 471 aaPredicted RBP23.62■■□□□ 1.37
PRKD2-212ENST00000599019 NDST4Q9H3R1 872 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 PANK4Q9NVE7 773 aa23.62■■□□□ 1.37
PRKD2-212ENST00000599019 SCN9AQ15858 1988 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 PSMD14O00487 310 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 MEIS2O14770 477 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 KRT86O43790 486 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 BMP3P12645 472 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 CACNB3P54284 484 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 CHMP4BP1P59074 171 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 ARHGAP4P98171 946 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 FKBP3Q00688 224 aaKnown RBP23.61■■□□□ 1.37
PRKD2-212ENST00000599019 FAM26FQ5R3K3 315 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 KCNK18Q7Z418 384 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 TSGA10Q9BZW7 698 aa23.61■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L15C9J2P7 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L13C9JLJ4 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L11C9JVI0 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L18D6R9N7 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L22D6RA61 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L17D6RBQ6 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L19D6RCP7 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L20D6RJB6 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 NDUFB10O96000 172 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 CIITAP33076 1130 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 SREBF1P36956 1147 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 FAM193AP78312 1265 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L24Q0WX57 530 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 USP17L6PQ6QN14 398 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 PPP4R3CPQ6ZMV5 832 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 LRRC55Q6ZSA7 311 aa23.6■■□□□ 1.37
PRKD2-212ENST00000599019 SPDYE3A6NKU9 549 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 ZRANB2O95218 330 aaKnown RBP eCLIP23.59■■□□□ 1.37
PRKD2-212ENST00000599019 PLA2G4BP0C869 781 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 TEX35Q5T0J7 233 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 TXLNBQ8N3L3 684 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 TTLL6Q8N841 843 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 NUCKS1Q9H1E3 243 aaKnown RBP23.59■■□□□ 1.37
PRKD2-212ENST00000599019 ZNF446Q9NWS9 450 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 REXO2Q9Y3B8 237 aaKnown RBP23.59■■□□□ 1.37
PRKD2-212ENST00000599019 RASSF10A6NK89 507 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 PIK3CDO00329 1044 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 RAD21O60216 631 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 BRD3Q15059 726 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 AOC3Q16853 763 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 ZCWPW2Q504Y3 356 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 ARHGEF10LQ9HCE6 1279 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 PLAGL2Q9UPG8 496 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 SIK3Q9Y2K2 1263 aa23.59■■□□□ 1.37
PRKD2-212ENST00000599019 CYP3A4P08684 503 aa23.58■■□□□ 1.37
PRKD2-212ENST00000599019 MARSP56192 900 aaKnown RBP23.58■■□□□ 1.37
PRKD2-212ENST00000599019 ECM1Q16610 540 aa23.58■■□□□ 1.37
PRKD2-212ENST00000599019 KIAA1328Q86T90 577 aa23.58■■□□□ 1.37
PRKD2-212ENST00000599019 ETNPPLQ8TBG4 499 aa23.58■■□□□ 1.37
PRKD2-212ENST00000599019 HPS3Q969F9 1004 aa23.58■■□□□ 1.37
PRKD2-212ENST00000599019 TDRD3Q9H7E2 651 aaKnown RBP23.58■■□□□ 1.37
PRKD2-212ENST00000599019 NHEJ1Q9H9Q4 299 aaPredicted RBP23.58■■□□□ 1.37
PRKD2-212ENST00000599019 AGPAT5Q9NUQ2 364 aa23.58■■□□□ 1.37
PRKD2-212ENST00000599019 KIAA1024Q9UPX6 916 aa23.58■■□□□ 1.37
PRKD2-212ENST00000599019 PSME4Q14997 1843 aa23.57■■□□□ 1.36
PRKD2-212ENST00000599019 FRMD3A2A2Y4 597 aa23.57■■□□□ 1.36
PRKD2-212ENST00000599019 FAM196BA6NMK8 535 aa23.57■■□□□ 1.36
PRKD2-212ENST00000599019 UTP14CQ5TAP6 766 aaKnown RBP23.57■■□□□ 1.36
PRKD2-212ENST00000599019 PCDHAC2Q9Y5I4 1007 aa23.57■■□□□ 1.36
PRKD2-212ENST00000599019 COL4A3BPQ9Y5P4 624 aa23.57■■□□□ 1.36
PRKD2-212ENST00000599019 CCDC151A5D8V7 595 aa23.56■■□□□ 1.36
PRKD2-212ENST00000599019 HERVK_113P62684 666 aa23.56■■□□□ 1.36
PRKD2-212ENST00000599019 IKQ13123 557 aaPredicted RBP23.56■■□□□ 1.36
PRKD2-212ENST00000599019 SPA17Q15506 151 aa23.56■■□□□ 1.36
PRKD2-212ENST00000599019 CCDC122Q5T0U0 273 aa23.56■■□□□ 1.36
PRKD2-212ENST00000599019 JAKMIP2Q96AA8 810 aa23.56■■□□□ 1.36
PRKD2-212ENST00000599019 HDAC9Q9UKV0 1011 aa23.56■■□□□ 1.36
PRKD2-212ENST00000599019 MYO6Q9UM54 1294 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms