RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 M0R2C6 588 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 MBD4O95243 580 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 HOXD8P13378 290 aaPredicted RBP12.29□□□□□ -0.44
SMG9-207ENST00000598860 EDN3P14138 238 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 FKBP1CQ5VVH2 108 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 ADGRA1Q86SQ6 560 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 RASAL3Q86YV0 1011 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 SCARF2Q96GP6 870 aaPredicted RBP12.29□□□□□ -0.44
SMG9-207ENST00000598860 RIOK1Q9BRS2 568 aaKnown RBP12.29□□□□□ -0.44
SMG9-207ENST00000598860 DSCC1Q9BVC3 393 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 CRNKL1Q9BZJ0 848 aaKnown RBP12.29□□□□□ -0.44
SMG9-207ENST00000598860 UPF2Q9HAU5 1272 aaKnown RBP12.29□□□□□ -0.44
SMG9-207ENST00000598860 ZMYM6O95789 1325 aa12.29□□□□□ -0.44
SMG9-207ENST00000598860 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
SMG9-207ENST00000598860 EIF2AK2P19525 551 aaKnown RBP12.28□□□□□ -0.44
SMG9-207ENST00000598860 CACNB3P54284 484 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 HYAL2Q12891 473 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 MAP3K11Q16584 847 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 PERM1Q5SV97 790 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 MEI1Q5TIA1 1274 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 KIAA0319Q5VV43 1072 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 BEND7Q8N7W2 519 aaPredicted RBP12.28□□□□□ -0.44
SMG9-207ENST00000598860 MIGA1Q8NAN2 632 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 STRBPQ96SI9 672 aaKnown RBP12.28□□□□□ -0.44
SMG9-207ENST00000598860 SEC62Q99442 399 aaKnown RBP12.28□□□□□ -0.44
SMG9-207ENST00000598860 NACAP1Q9BZK3 213 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 TGIF2Q9GZN2 237 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 AATFQ9NY61 560 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMG9-207ENST00000598860 SALL4Q9UJQ4 1053 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 MKL2Q9ULH7 1088 aa12.28□□□□□ -0.44
SMG9-207ENST00000598860 THSD7BQ9C0I4 1608 aa12.27□□□□□ -0.44
SMG9-207ENST00000598860 A0A1W2PP55 124 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 USP2O75604 605 aaPredicted RBP12.27□□□□□ -0.45
SMG9-207ENST00000598860 GHRHP01286 108 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 CHGBP05060 677 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 IREB2P48200 963 aaKnown RBP12.27□□□□□ -0.45
SMG9-207ENST00000598860 PEAR1Q5VY43 1037 aaPredicted RBP12.27□□□□□ -0.45
SMG9-207ENST00000598860 GIMAP6Q6P9H5 292 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 ELMSAN1Q6PJG2 1045 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 ZNF589Q86UQ0 364 aaPredicted RBP12.27□□□□□ -0.45
SMG9-207ENST00000598860 FAM83AQ86UY5 434 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 LCORLQ8N3X6 602 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 SREK1Q8WXA9 508 aaKnown RBP12.27□□□□□ -0.45
SMG9-207ENST00000598860 TEPSINQ96N21 525 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 LPIN3Q9BQK8 851 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 TMEM39BQ9GZU3 492 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 ARMT1Q9H993 441 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 JPH1Q9HDC5 661 aaPredicted RBP12.27□□□□□ -0.45
SMG9-207ENST00000598860 USP40Q9NVE5 1235 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 FZD1Q9UP38 647 aa12.27□□□□□ -0.45
SMG9-207ENST00000598860 COL2A1P02458 1487 aaPredicted RBP12.27□□□□□ -0.45
SMG9-207ENST00000598860 RGS9O75916 674 aaPredicted RBP12.26□□□□□ -0.45
SMG9-207ENST00000598860 HSPD1P10809 573 aaKnown RBP12.26□□□□□ -0.45
SMG9-207ENST00000598860 MCCP23508 829 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 TAF1CQ15572 869 aaPredicted RBP12.26□□□□□ -0.45
SMG9-207ENST00000598860 ALX1Q15699 326 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 CDC42EP5Q6NZY7 148 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 LINC00114Q6XXX2 140 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 CCDC129Q6ZRS4 1044 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 HOOK2Q96ED9 719 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 LSG1Q9H089 658 aaKnown RBP12.26□□□□□ -0.45
SMG9-207ENST00000598860 EHD4Q9H223 541 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 IL25Q9H293 177 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 ATP8A2Q9NTI2 1148 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 CTNNA3Q9UI47 895 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 SLC4A4Q9Y6R1 1079 aa12.26□□□□□ -0.45
SMG9-207ENST00000598860 RHBDL3P58872 404 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 DYNLL1P63167 89 aaKnown RBP12.25□□□□□ -0.45
SMG9-207ENST00000598860 NCAPG2Q86XI2 1143 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 AMOTL1Q8IY63 956 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 ANKRD13AQ8IZ07 590 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 GLIS3Q8NEA6 775 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 FAM151AQ8WW52 585 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 MAP4K1Q92918 833 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 SMG9Q9H0W8 520 aaKnown RBP12.25□□□□□ -0.45
SMG9-207ENST00000598860 NAPBQ9H115 298 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 RBSNQ9H1K0 784 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 CCSER2Q9H7U1 834 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 RNF186Q9NXI6 227 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 FRRS1LQ9P0K9 344 aa12.25□□□□□ -0.45
SMG9-207ENST00000598860 SSC5DA1L4H1 1573 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 SIPA1L1O43166 1804 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 LILRB5O75023 590 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 TRPA1O75762 1119 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 KIF4AO95239 1232 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 APPP05067 770 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 ST13P50502 369 aaKnown RBP12.24□□□□□ -0.45
SMG9-207ENST00000598860 TCP10Q12799 353 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 IFNL3Q8IZI9 196 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 SH3RF3Q8TEJ3 882 aaPredicted RBP12.24□□□□□ -0.45
SMG9-207ENST00000598860 CLMNQ96JQ2 1002 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 SPACA7Q96KW9 195 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 IDI2Q9BXS1 227 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 SAGE1Q9NXZ1 904 aa12.24□□□□□ -0.45
SMG9-207ENST00000598860 ARPP21Q9UBL0 812 aaPredicted RBP12.24□□□□□ -0.45
SMG9-207ENST00000598860 PCNTO95613 3336 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 GSG1L2A8MUP6 293 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 ENTPD3O75355 529 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms