RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 MAFGO15525 162 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 KINO60870 393 aaKnown RBP17.43■□□□□ 0.38
UPF1-206ENST00000598471 EIF3JO75822 258 aaKnown RBP17.43■□□□□ 0.38
UPF1-206ENST00000598471 PGK2P07205 417 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 HSPA8P11142 646 aaKnown RBP17.43■□□□□ 0.38
UPF1-206ENST00000598471 ITGB5P18084 799 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 UBA7P41226 1012 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 SYKP43405 635 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 GRB14Q14449 540 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 PDIA5Q14554 519 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 IL17AQ16552 155 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 CAVIN1Q6NZI2 390 aaKnown RBP17.43■□□□□ 0.38
UPF1-206ENST00000598471 CYP2W1Q8TAV3 490 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 SYMPKQ92797 1274 aaKnown RBP17.43■□□□□ 0.38
UPF1-206ENST00000598471 HAS1Q92839 578 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 ZNF577Q9BSK1 485 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 GOLPH3LQ9H4A5 285 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 LRWD1Q9UFC0 647 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 TCEAL9Q9UHQ7 104 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 KCNH3Q9ULD8 1083 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 STK24Q9Y6E0 443 aa17.43■□□□□ 0.38
UPF1-206ENST00000598471 PLXNB2O15031 1838 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 EDNRBP24530 442 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 NDUFA8P51970 172 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 LBX1P52954 281 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 SPECC1Q5M775 1068 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 LRCH2Q5VUJ6 765 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 DPP9Q86TI2 863 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 IGSF22Q8N9C0 903 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 RASSF8Q8NHQ8 419 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 SLC5A5Q92911 643 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 CCDC34Q96HJ3 373 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 INPP4AQ96PE3 977 aaPredicted RBP17.42■□□□□ 0.38
UPF1-206ENST00000598471 RIT2Q99578 217 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 WDR11Q9BZH6 1224 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 DACT1Q9NYF0 836 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 CCDC39Q9UFE4 941 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 THSD7BQ9C0I4 1608 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 PCNTO95613 3336 aa17.42■□□□□ 0.38
UPF1-206ENST00000598471 IPO5O00410 1097 aaKnown RBP17.41■□□□□ 0.38
UPF1-206ENST00000598471 GAS7O60861 476 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 NR1I2O75469 434 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 ARP10275 920 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 CTCFP49711 727 aaPredicted RBP17.41■□□□□ 0.38
UPF1-206ENST00000598471 ZNF792Q3KQV3 632 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 CCDC183Q5T5S1 534 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 KRT79Q5XKE5 535 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
UPF1-206ENST00000598471 FMR1NBQ8N0W7 255 aaPredicted RBP17.41■□□□□ 0.38
UPF1-206ENST00000598471 ENGASEQ8NFI3 743 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 ERMNQ8TAM6 284 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 ZFP91Q96JP5 570 aaPredicted RBP17.41■□□□□ 0.38
UPF1-206ENST00000598471 TEKT3Q9BXF9 490 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 KCNH7Q9NS40 1196 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 DIS3Q9Y2L1 958 aaKnown RBP17.41■□□□□ 0.38
UPF1-206ENST00000598471 ZNF236Q9UL36 1845 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 LCTP09848 1927 aa17.41■□□□□ 0.38
UPF1-206ENST00000598471 SLC26A4O43511 780 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 HAUS3Q68CZ6 603 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 CABP7Q86V35 215 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 CALML4Q96GE6 196 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 EPSTI1Q96J88 318 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 CFHR5Q9BXR6 569 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 CCSER1Q9C0I3 900 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 NUP62CLQ9H1M0 184 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 AGO4Q9HCK5 861 aaKnown RBP17.4■□□□□ 0.38
UPF1-206ENST00000598471 SAGE1Q9NXZ1 904 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 USP25Q9UHP3 1055 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 ASTN1O14525 1302 aa17.4■□□□□ 0.38
UPF1-206ENST00000598471 TNPO2O14787 897 aaKnown RBP17.39■□□□□ 0.37
UPF1-206ENST00000598471 ZNF202O95125 648 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 FCGRTP55899 365 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 SNW1Q13573 536 aaKnown RBP17.39■□□□□ 0.37
UPF1-206ENST00000598471 KIF22Q14807 665 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 MORC4Q8TE76 937 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 SNX29Q8TEQ0 813 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 FGD4Q96M96 766 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 TIGD1Q96MW7 591 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 KDM3AQ9Y4C1 1321 aa17.39■□□□□ 0.37
UPF1-206ENST00000598471 POTEMA6NI47 508 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 CTAGE5O15320 804 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 POLR2DO15514 142 aaKnown RBP17.38■□□□□ 0.37
UPF1-206ENST00000598471 COBLO75128 1261 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 PSMD10O75832 226 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 LETM1O95202 739 aaPredicted RBP17.38■□□□□ 0.37
UPF1-206ENST00000598471 ICAM3P32942 547 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 RGS2P41220 211 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 MAP2K5Q13163 448 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 PPP2R5CQ13362 524 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 MORN1Q5T089 497 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 NCAPH2Q6IBW4 605 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 KCNV1Q6PIU1 500 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 USP49Q70CQ1 688 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 PDILTQ8N807 584 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
UPF1-206ENST00000598471 GJA10Q969M2 543 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms