RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 STYK1Q6J9G0 422 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 ZC3H3Q8IXZ2 948 aaKnown RBP25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 GBP3Q9H0R5 595 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 PITPNM2Q9BZ72 1349 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 FRMD3A2A2Y4 597 aa25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 FKBP3Q00688 224 aaKnown RBP25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 CDC37Q16543 378 aaPredicted RBP25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 FAM26FQ5R3K3 315 aa25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 ZFPM1Q8IX07 1006 aa25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 PCMTD1Q96MG8 357 aaPredicted RBP25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 TRIM10Q9UDY6 481 aa25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 PCDHA1Q9Y5I3 950 aa25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 ATAD5Q96QE3 1844 aa25.52■■□□□ 1.68
SPTBN4-209ENST00000596411 SCN9AQ15858 1988 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 GNA14O95837 355 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 IDEP14735 1019 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 CCDC65Q8IXS2 484 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 PCDHA2Q9Y5H9 948 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 MMP10P09238 476 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 ATP2B2Q01814 1243 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 Q4G0T1 1027 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 BEND6Q5SZJ8 279 aaPredicted RBP25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 WDR93Q6P2C0 686 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 PANK4Q9NVE7 773 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 SAR1BQ9Y6B6 198 aa25.51■■□□□ 1.67
SPTBN4-209ENST00000596411 DDTLA6NHG4 134 aaPredicted RBP25.5■■□□□ 1.67
SPTBN4-209ENST00000596411 MARCH6O60337 910 aa25.5■■□□□ 1.67
SPTBN4-209ENST00000596411 CKAP4Q07065 602 aaKnown RBP25.5■■□□□ 1.67
SPTBN4-209ENST00000596411 SIAH1Q8IUQ4 282 aa25.5■■□□□ 1.67
SPTBN4-209ENST00000596411 NUCKS1Q9H1E3 243 aaKnown RBP25.5■■□□□ 1.67
SPTBN4-209ENST00000596411 ZSWIM4Q9H7M6 989 aa25.5■■□□□ 1.67
SPTBN4-209ENST00000596411 COL4A3BPQ9Y5P4 624 aa25.5■■□□□ 1.67
SPTBN4-209ENST00000596411 MEIS2O14770 477 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 NKRFO15226 690 aaKnown RBP eCLIP25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 FOSP01100 380 aaPredicted RBP25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 SPA17Q15506 151 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 HAUS3Q68CZ6 603 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 PPP4R3CPQ6ZMV5 832 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 SH3BP5LQ7L8J4 393 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 KCTD17Q8N5Z5 321 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 EEF2KMTQ96G04 330 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 CCDC42Q96M95 316 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 AMNQ9BXJ7 453 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 ENTPD3O75355 529 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 PLA2G4BP0C869 781 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 ICA1Q05084 483 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 KIF5AQ12840 1032 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 BTNL9Q6UXG8 535 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 ETNPPLQ8TBG4 499 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 BAP1Q92560 729 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 SYN2Q92777 582 aaPredicted RBP25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 PNKPQ96T60 521 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 LACRTQ9GZZ8 138 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 DBNDD1Q9H9R9 158 aa25.49■■□□□ 1.67
SPTBN4-209ENST00000596411 SSU72P8A0A1W2PR75 194 aa25.48■■□□□ 1.67
SPTBN4-209ENST00000596411 MAPK8IP2Q13387 824 aaPredicted RBP25.48■■□□□ 1.67
SPTBN4-209ENST00000596411 ARHGAP20Q9P2F6 1191 aa25.48■■□□□ 1.67
SPTBN4-209ENST00000596411 RCCD1A6NED2 376 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L15C9J2P7 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L13C9JLJ4 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L11C9JVI0 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L18D6R9N7 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L22D6RA61 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L17D6RBQ6 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L19D6RCP7 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L20D6RJB6 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USO1O60763 962 aaKnown RBP25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 ATP1A1P05023 1023 aaKnown RBP25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 CIITAP33076 1130 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 SPIRE1Q08AE8 756 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L24Q0WX57 530 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 USP17L6PQ6QN14 398 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 TXLNBQ8N3L3 684 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 ST7Q9NRC1 585 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 ZNF263O14978 683 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 ECE2O60344 883 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 CYP11B2P19099 503 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 MCM3P25205 808 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 SREBF1P36956 1147 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 ARHGAP4P98171 946 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 EDRF1Q3B7T1 1238 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 PDXDC1Q6P996 788 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 KIAA0825Q8IV33 1275 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 TRIM58Q8NG06 486 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 TRIM34Q9BYJ4 488 aa25.47■■□□□ 1.67
SPTBN4-209ENST00000596411 RGPD3A6NKT7 1758 aaPredicted RBP25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 RGPD4Q7Z3J3 1758 aa25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 EPHB6O15197 1021 aa25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 PJA2O43164 708 aa25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 PRLRP16471 622 aa25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 SMC1AQ14683 1233 aaKnown RBP25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 HDXQ7Z353 690 aa25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 SECISBP2LQ93073 1101 aaKnown RBP25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 FAM20AQ96MK3 541 aa25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 L1RE1Q9UN81 338 aa25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 KIAA1024Q9UPX6 916 aa25.46■■□□□ 1.67
SPTBN4-209ENST00000596411 TARSL2A2RTX5 802 aaKnown RBP25.45■■□□□ 1.67
SPTBN4-209ENST00000596411 KIF11P52732 1056 aa25.45■■□□□ 1.67
SPTBN4-209ENST00000596411 SLC12A3P55017 1021 aa25.45■■□□□ 1.67
SPTBN4-209ENST00000596411 NCAPH2Q6IBW4 605 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms