RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 JAKMIP3Q5VZ66 844 aa16.66■□□□□ 0.26
VRK3-206ENST00000594090 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
VRK3-206ENST00000594090 AIFM3Q96NN9 605 aa16.66■□□□□ 0.26
VRK3-206ENST00000594090 MYH7BA7E2Y1 1941 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 SPATA31C2B4DYI2 1134 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 GGPS1O95749 300 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 MMP3P08254 477 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 SYN1P17600 705 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 ITGB5P18084 799 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 SREBF1P36956 1147 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 RABEP1Q15276 862 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 CELF3Q5SZQ8 465 aaKnown RBP16.65■□□□□ 0.26
VRK3-206ENST00000594090 MCTP2Q6DN12 878 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 NLRX1Q86UT6 975 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 DHX37Q8IY37 1157 aaKnown RBP16.65■□□□□ 0.26
VRK3-206ENST00000594090 BICD2Q8TD16 824 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 TBC1D32Q96NH3 1257 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 LIMCH1Q9UPQ0 1083 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 UBIAD1Q9Y5Z9 338 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 DOCK5Q9H7D0 1870 aa16.65■□□□□ 0.26
VRK3-206ENST00000594090 MROH7Q68CQ1 1323 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 ARVCFO00192 962 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 SORBS3O60504 671 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 KPNA6O60684 536 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 PQBP1O60828 265 aaKnown RBP16.64■□□□□ 0.25
VRK3-206ENST00000594090 DTNBO60941 627 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 CDK7P50613 346 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 NLRP5P59047 1200 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 TLE2Q04725 743 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 MYSM1Q5VVJ2 828 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 ANKRD33Q7Z3H0 272 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
VRK3-206ENST00000594090 PPTC7Q8NI37 304 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 RASGRP4Q8TDF6 673 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 MTG1Q9BT17 334 aaPredicted RBP16.64■□□□□ 0.25
VRK3-206ENST00000594090 JADE2Q9NQC1 790 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 SCN10AQ9Y5Y9 1956 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 LTBP2Q14767 1821 aa16.64■□□□□ 0.25
VRK3-206ENST00000594090 GRIN2DO15399 1336 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 PSMC6P62333 389 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 ARHGAP4P98171 946 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 MTMR1Q13613 665 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 SLC43A3Q8NBI5 491 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 NSUN7Q8NE18 718 aaKnown RBP16.63■□□□□ 0.25
VRK3-206ENST00000594090 CDHR1Q96JP9 859 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 TOX2Q96NM4 488 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 BACH2Q9BYV9 841 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 MLXIPQ9HAP2 919 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 PDLIM7Q9NR12 457 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 ORC3Q9UBD5 711 aaPredicted RBP16.63■□□□□ 0.25
VRK3-206ENST00000594090 PCDHA4Q9UN74 947 aa16.63■□□□□ 0.25
VRK3-206ENST00000594090 HOXD8P13378 290 aaPredicted RBP16.62■□□□□ 0.25
VRK3-206ENST00000594090 NEDD9Q14511 834 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 DGKDQ16760 1214 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 HSDL1Q3SXM5 330 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 METTL7BQ6UX53 244 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 DAGLBQ8NCG7 672 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 CRYGNQ8WXF5 182 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 MXRA8Q9BRK3 442 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 BCAS3Q9H6U6 928 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 PCDH10Q9P2E7 1040 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 DCDC2CA8MYV0 355 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 CLTBP09497 229 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 KCNA2P16389 499 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 FAAP100Q0VG06 881 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 NPY5RQ15761 445 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 CYFIP1Q7L576 1253 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 FAM126BQ8IXS8 530 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 WASF1Q92558 559 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 SEZ6LQ9BYH1 1024 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 PRDM5Q9NQX1 630 aaPredicted RBP16.62■□□□□ 0.25
VRK3-206ENST00000594090 PRKAG2Q9UGJ0 569 aa16.62■□□□□ 0.25
VRK3-206ENST00000594090 M0R2N6 131 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 MAFGO15525 162 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 ST18O60284 1047 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 JAK2O60674 1132 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 ATP9AO75110 1047 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 CYP3A4P08684 503 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 FDPSP14324 419 aaKnown RBP16.61■□□□□ 0.25
VRK3-206ENST00000594090 XBP1P17861 261 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 CEP55Q53EZ4 464 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 GALNT17Q6IS24 598 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 SH3RF1Q7Z6J0 888 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 CCDC83Q8IWF9 413 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 GIMAP8Q8ND71 665 aaPredicted RBP16.61■□□□□ 0.25
VRK3-206ENST00000594090 CYP2W1Q8TAV3 490 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
VRK3-206ENST00000594090 ALG1Q9BT22 464 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 PHF20Q9BVI0 1012 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 SH2B1Q9NRF2 756 aaPredicted RBP16.61■□□□□ 0.25
VRK3-206ENST00000594090 KCNJ14Q9UNX9 436 aa16.61■□□□□ 0.25
VRK3-206ENST00000594090 TRIM43BA6NCK2 446 aa16.6■□□□□ 0.25
VRK3-206ENST00000594090 NOP56O00567 594 aaKnown RBP16.6■□□□□ 0.25
VRK3-206ENST00000594090 TLR3O15455 904 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms