RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 PRR12Q9ULL5 1215 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 LTBP3Q9NS15 1303 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 SASH3O75995 380 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 PRCPP42785 496 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 STIM1Q13586 685 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 TNIP1Q15025 636 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 LONRF2Q1L5Z9 754 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 TMEM119Q4V9L6 283 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 JDP2Q8WYK2 163 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 P2RX7Q99572 595 aaKnown RBP15.9■□□□□ 0.14
RANBP3-229ENST00000592771 THAP9Q9H5L6 903 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 GOPCQ9HD26 462 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 MYOZ2Q9NPC6 264 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 PSD3Q9NYI0 1048 aa15.9■□□□□ 0.14
RANBP3-229ENST00000592771 OPLAHO14841 1288 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 SLC26A4O43511 780 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 PLA2G6O60733 806 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 FOSP01100 380 aaPredicted RBP15.89■□□□□ 0.13
RANBP3-229ENST00000592771 RPS12P25398 132 aaKnown RBP15.89■□□□□ 0.13
RANBP3-229ENST00000592771 CAP2P40123 477 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 AMPD3Q01432 767 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 NBPF9Q3BBW0 867 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 CNNM4Q6P4Q7 775 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 KCNMB3Q9NPA1 279 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 ATAD5Q96QE3 1844 aa15.89■□□□□ 0.13
RANBP3-229ENST00000592771 SMCHD1A6NHR9 2005 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 POTEMA6NI47 508 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 STAT2P52630 851 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 SNAP25P60880 206 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 ERVK-24P63145 666 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 COBLL1Q53SF7 1204 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 HYIQ5T013 277 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 HDXQ7Z353 690 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 OR8K1Q8NGG5 319 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 IRX2Q9BZI1 471 aaPredicted RBP15.88■□□□□ 0.13
RANBP3-229ENST00000592771 VCPKMTQ9H867 229 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 PIK3CDO00329 1044 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 OAS2P29728 719 aaKnown RBP15.88■□□□□ 0.13
RANBP3-229ENST00000592771 KRT9P35527 623 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 CCT6AP40227 531 aaKnown RBP15.88■□□□□ 0.13
RANBP3-229ENST00000592771 TRAF1Q13077 416 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 IKQ13123 557 aaPredicted RBP15.88■□□□□ 0.13
RANBP3-229ENST00000592771 KRT79Q5XKE5 535 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 SPICE1Q8N0Z3 855 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 SLC35F6Q8N357 371 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 RETREG2Q8NC44 543 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 NLGN2Q8NFZ4 835 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 IQCDQ96DY2 449 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 FHDC1Q9C0D6 1143 aaPredicted RBP15.88■□□□□ 0.13
RANBP3-229ENST00000592771 VPS16Q9H269 839 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 HAUS4Q9H6D7 363 aa15.88■□□□□ 0.13
RANBP3-229ENST00000592771 SHTN1A0MZ66 631 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 CTAGE15A4D2H0 777 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 LGALS16A8MUM7 142 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 EIF3JO75822 258 aaKnown RBP15.87■□□□□ 0.13
RANBP3-229ENST00000592771 CTAGE8P0CG41 777 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 SREBF1P36956 1147 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 ARHGAP25P42331 645 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 ARHGAP4P98171 946 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 TSR1Q2NL82 804 aaKnown RBP15.87■□□□□ 0.13
RANBP3-229ENST00000592771 FAM83BQ5T0W9 1011 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 SV2BQ7L1I2 683 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 CTAGE6Q86UF2 777 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 CTAGE4Q8IX94 777 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 SNX29Q8TEQ0 813 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 CCDC47Q96A33 483 aaKnown RBP15.87■□□□□ 0.13
RANBP3-229ENST00000592771 DHTKD1Q96HY7 919 aaPredicted RBP15.87■□□□□ 0.13
RANBP3-229ENST00000592771 DNAJC7Q99615 494 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 NUDT12Q9BQG2 462 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 NUP58Q9BVL2 599 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 RANBP17Q9H2T7 1088 aaKnown RBP15.87■□□□□ 0.13
RANBP3-229ENST00000592771 SH2D4AQ9H788 454 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 ANKZF1Q9H8Y5 726 aa15.87■□□□□ 0.13
RANBP3-229ENST00000592771 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
RANBP3-229ENST00000592771 PSMA7O14818 248 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 MCM3P25205 808 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 HOXA7P31268 230 aaPredicted RBP15.86■□□□□ 0.13
RANBP3-229ENST00000592771 CIITAP33076 1130 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 UBXN1Q04323 297 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 Q4G0T1 1027 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 BEND6Q5SZJ8 279 aaPredicted RBP15.86■□□□□ 0.13
RANBP3-229ENST00000592771 MB21D1Q8N884 522 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 EHBP1Q8NDI1 1231 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 LARP4BQ92615 738 aaKnown RBP15.86■□□□□ 0.13
RANBP3-229ENST00000592771 RAD54LQ92698 747 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 EXOC4Q96A65 974 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 TEPSINQ96N21 525 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 EPC1Q9H2F5 836 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 TAB2Q9NYJ8 693 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 CAPN11Q9UMQ6 739 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 PHF20L1A8MW92 1017 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 TBX3O15119 743 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 ASNSP08243 561 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 DNM2P50570 870 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 ASIC1P78348 528 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 KRT83P78385 493 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 USH1GQ495M9 461 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 MIGA2Q7L4E1 593 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 ACRBPQ8NEB7 543 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 ETNPPLQ8TBG4 499 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms