RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 KIAA1024Q9UPX6 916 aa18.41■□□□□ 0.54
PRKCSH-217ENST00000592741 ATRNL1Q5VV63 1379 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 PSMD14O00487 310 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 MEIS2O14770 477 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 KRT86O43790 486 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 ENTPD3O75355 529 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 PLA2G4BP0C869 781 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 IKQ13123 557 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 AOC3Q16853 763 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 SYDE2Q5VT97 1194 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 CCDC84Q86UT8 332 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 FBXO11Q86XK2 927 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 ZMYND15Q9H091 742 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 MYO6Q9UM54 1294 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 SIK3Q9Y2K2 1263 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 E9PMD0 336 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 NKRFO15226 690 aaKnown RBP eCLIP18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 SEC31AO94979 1220 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 NDUFB10O96000 172 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 ARHGAP4P98171 946 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 RBM26Q5T8P6 1007 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 HAUS3Q68CZ6 603 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 TDRD3Q9H7E2 651 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 ARFGAP3Q9NP61 516 aa18.4■□□□□ 0.54
PRKCSH-217ENST00000592741 COL2A1P02458 1487 aaPredicted RBP18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 POTEB3A0JP26 581 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 CTAGE15A4D2H0 777 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 POTECB2RU33 542 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 CTAGE8P0CG41 777 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 AMPD2Q01433 879 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 BRD3Q15059 726 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 POTEBQ6S5H4 581 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 CTAGE6Q86UF2 777 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 GPBP1Q86WP2 473 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 CTAGE4Q8IX94 777 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 GLIS3Q8NEA6 775 aa18.39■□□□□ 0.53
PRKCSH-217ENST00000592741 HNRNPH3P31942 346 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 FKBP3Q00688 224 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 TBX3O15119 743 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 KIF20AO95235 890 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 FOSP01100 380 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 BMP3P12645 472 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 CHRNA5P30532 468 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 SPA17Q15506 151 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 USH1GQ495M9 461 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 Q4G0T1 1027 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 ZCWPW2Q504Y3 356 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 SUPT20HQ8NEM7 779 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 ERMNQ8TAM6 284 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 CRYGNQ8WXF5 182 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 CCDC42Q96M95 316 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 UIMC1Q96RL1 719 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 TSGA10Q9BZW7 698 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 MMRN2Q9H8L6 949 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 FAM207AQ9NSI2 230 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 COL4A3BPQ9Y5P4 624 aa18.38■□□□□ 0.53
PRKCSH-217ENST00000592741 CCDC151A5D8V7 595 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 GH2P01242 217 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 SNAP25P60880 206 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 CC2D2BQ6DHV5 1058 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 TRAPPC11Q7Z392 1133 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 MSANTD4Q8NCY6 345 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 ETNPPLQ8TBG4 499 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 ANKZF1Q9H8Y5 726 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 PLAGL2Q9UPG8 496 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 STK24Q9Y6E0 443 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 TRAF5O00463 557 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 MED24O75448 989 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 KRT18P05783 430 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 STAT3P40763 770 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 MMP14P50281 582 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 VAV2P52735 878 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 CCDC40Q4G0X9 1142 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 PRR16Q569H4 304 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 CEP63Q96MT8 703 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
PRKCSH-217ENST00000592741 GNA14O95837 355 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 CYP11B2P19099 503 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 SREBF1P36956 1147 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 PLA2G4AP47712 749 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 BTNL9Q6UXG8 535 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 CSRNP1Q96S65 589 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 TBC1D7Q9P0N9 293 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 TFR2Q9UP52 801 aa18.36■□□□□ 0.53
PRKCSH-217ENST00000592741 PITPNM2Q9BZ72 1349 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 TBC1D8O95759 1140 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 KIF5AQ12840 1032 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 ZNF772Q68DY9 489 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 NCAPH2Q6IBW4 605 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 NEK11Q8NG66 645 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 C7orf43Q8WVR3 580 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 EDEM3Q9BZQ6 932 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 TMOD2Q9NZR1 351 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 PCDHA2Q9Y5H9 948 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 EPHB6O15197 1021 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 SLC12A3P55017 1021 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 PRMT6Q96LA8 375 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms