RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 VWCEQ96DN2 955 aa11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 ZFP91Q96JP5 570 aaPredicted RBP11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 FAM161BQ96MY7 647 aa11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 SPATA33Q96N06 139 aa11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 TTYH1Q9H313 450 aaPredicted RBP11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 BRPF3Q9ULD4 1205 aa11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 NOD1Q9Y239 953 aa11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 MYH6P13533 1939 aa11.17□□□□□ -0.62
PRKCSH-215ENST00000592435 FIBPO43427 364 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 REC8O95072 547 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 IQCF3P0C7M6 154 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 UBA1P22314 1058 aaKnown RBP11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 DNAJB2P25686 324 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 HSPA4P34932 840 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 PSEN2P49810 448 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 CHMP4BP1P59074 171 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 FUT2Q10981 343 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 NEDD9Q14511 834 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 PTGISQ16647 500 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 GDF6Q6KF10 455 aaPredicted RBP11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 OTOP2Q7RTS6 562 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 RAB11FIP4Q86YS3 637 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 FBXL16Q8N461 479 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 CAGE1Q8TC20 777 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 PPP1R13LQ8WUF5 828 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 SCLYQ96I15 445 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 CTAGE1Q96RT6 745 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 SENP7Q9BQF6 1050 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 RTEL1Q9NZ71 1219 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 GTF2IRD1Q9UHL9 959 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 SCN10AQ9Y5Y9 1956 aa11.16□□□□□ -0.62
PRKCSH-215ENST00000592435 hCG_1642624A0A1W2PR95 340 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 EPB41L2O43491 1005 aaKnown RBP11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 PARNO95453 639 aaKnown RBP11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 NEFLP07196 543 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 RBL2Q08999 1139 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 MFSD10Q14728 455 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 RTN1Q16799 776 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 KIAA0753Q2KHM9 967 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 METTL7BQ6UX53 244 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 NLRX1Q86UT6 975 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 CCDC155Q8N6L0 562 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 SLC17A8Q8NDX2 589 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 TCEANC2Q96MN5 208 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 C16orf70Q9BSU1 422 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 USP26Q9BXU7 913 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 CXXC1Q9P0U4 656 aaPredicted RBP11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 HDAC6Q9UBN7 1215 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 SLC4A7Q9Y6M7 1214 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 KIAA1217Q5T5P2 1943 aa11.15□□□□□ -0.62
PRKCSH-215ENST00000592435 BAZ2BQ9UIF8 2168 aaKnown RBP11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 SPDYE3A6NKU9 549 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 H3BRB1 525 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 MAFGO15525 162 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 ZNF286BP0CG31 522 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 ACTN1P12814 892 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 FGD1P98174 961 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 SEMA3FQ13275 785 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 PTK7Q13308 1070 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 HEATR3Q7Z4Q2 680 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 DEFB128Q7Z7B8 93 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 ZNF713Q8N859 430 aaPredicted RBP11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 PBX4Q9BYU1 374 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 ZNF576Q9H609 170 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 TUT1Q9H6E5 874 aaKnown RBP11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 MSRAQ9UJ68 235 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 PCDHA6Q9UN73 950 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 PCDHA8Q9Y5H6 950 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 SNX14Q9Y5W7 946 aa11.14□□□□□ -0.63
PRKCSH-215ENST00000592435 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 GOLGA8BA8MQT2 603 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 SORBS3O60504 671 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 SELPP16109 830 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 ITGB5P18084 799 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 PSMA5P28066 241 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 CDC27P30260 824 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 PBX2P40425 430 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 RAB30Q15771 203 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
PRKCSH-215ENST00000592435 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms