RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 CCDC12Q8WUD4 166 aaPredicted RBP16.65■□□□□ 0.26
DDX39A-217ENST00000592391 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
DDX39A-217ENST00000592391 EHMT1Q9H9B1 1298 aa16.65■□□□□ 0.26
DDX39A-217ENST00000592391 TMEM39AQ9NV64 488 aa16.65■□□□□ 0.26
DDX39A-217ENST00000592391 RTEL1Q9NZ71 1219 aa16.65■□□□□ 0.26
DDX39A-217ENST00000592391 ESYT2A0FGR8 921 aa16.64■□□□□ 0.25
DDX39A-217ENST00000592391 SPATA31C2B4DYI2 1134 aa16.64■□□□□ 0.25
DDX39A-217ENST00000592391 CPLX1O14810 134 aa16.64■□□□□ 0.25
DDX39A-217ENST00000592391 TLR3O15455 904 aaKnown RBP16.64■□□□□ 0.25
DDX39A-217ENST00000592391 PPFIA3O75145 1194 aa16.64■□□□□ 0.25
DDX39A-217ENST00000592391 GGPS1O95749 300 aa16.64■□□□□ 0.25
DDX39A-217ENST00000592391 FOSP01100 380 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-217ENST00000592391 CLK2P49760 499 aaKnown RBP16.64■□□□□ 0.25
DDX39A-217ENST00000592391 STK3Q13188 491 aa16.64■□□□□ 0.25
DDX39A-217ENST00000592391 NLRX1Q86UT6 975 aa16.64■□□□□ 0.25
DDX39A-217ENST00000592391 TBX21Q9UL17 535 aa16.64■□□□□ 0.25
DDX39A-217ENST00000592391 CD4P01730 458 aa16.63■□□□□ 0.25
DDX39A-217ENST00000592391 AK2P54819 239 aa16.63■□□□□ 0.25
DDX39A-217ENST00000592391 SEMA3FQ13275 785 aa16.63■□□□□ 0.25
DDX39A-217ENST00000592391 AP3B2Q13367 1082 aa16.63■□□□□ 0.25
DDX39A-217ENST00000592391 DGKDQ16760 1214 aa16.63■□□□□ 0.25
DDX39A-217ENST00000592391 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
DDX39A-217ENST00000592391 TRIM22Q8IYM9 498 aa16.63■□□□□ 0.25
DDX39A-217ENST00000592391 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
DDX39A-217ENST00000592391 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
DDX39A-217ENST00000592391 TPCN1Q9ULQ1 816 aa16.63■□□□□ 0.25
DDX39A-217ENST00000592391 HOXD8P13378 290 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-217ENST00000592391 RAG1P15918 1043 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 ITGB5P18084 799 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 ITGB8P26012 769 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
DDX39A-217ENST00000592391 NEDD9Q14511 834 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 NBPF20Q3BBV1 942 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 HSDL1Q3SXM5 330 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 CCDC148Q8NFR7 591 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 BADQ92934 168 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 GPRASP2Q96D09 838 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 CDHR1Q96JP9 859 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 PGBD1Q96JS3 809 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 SPATA33Q96N06 139 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 ANO3Q9BYT9 981 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-217ENST00000592391 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 C6orf50Q9HD87 102 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 UBIAD1Q9Y5Z9 338 aa16.62■□□□□ 0.25
DDX39A-217ENST00000592391 LTBP2Q14767 1821 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 SCN10AQ9Y5Y9 1956 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 SORBS3O60504 671 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 B4GALT4O60513 344 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 PFKFB2O60825 505 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 GNA11P29992 359 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 NEK4P51957 841 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 SCRN1Q12765 414 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 MCTP2Q6DN12 878 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 NFRKBQ6P4R8 1299 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 METTL7BQ6UX53 244 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 TMEM260Q9NX78 707 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
DDX39A-217ENST00000592391 TRIOBPQ9H2D6 2365 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 CDKL5O76039 1030 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 DEXIO95424 95 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 TIMP1P01033 207 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 SREBF1P36956 1147 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 PTPN11Q06124 597 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-217ENST00000592391 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 JAKMIP3Q5VZ66 844 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 CYFIP1Q7L576 1253 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 REXO1Q8N1G1 1221 aaKnown RBP16.6■□□□□ 0.25
DDX39A-217ENST00000592391 GIMAP8Q8ND71 665 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-217ENST00000592391 BICD2Q8TD16 824 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 KAT2BQ92831 832 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 TRPV6Q9H1D0 765 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 BCAS3Q9H6U6 928 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
DDX39A-217ENST00000592391 NOP56O00567 594 aaKnown RBP16.59■□□□□ 0.25
DDX39A-217ENST00000592391 ADAMTS3O15072 1205 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 MAFGO15525 162 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 F2P00734 622 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 SUPT20HL2P0C7V6 817 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 ZNF286BP0CG31 522 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 MTMR1Q13613 665 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 TDHQ8IZJ6 230 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 MXRA8Q9BRK3 442 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 KATNAL1Q9BW62 490 aa16.59■□□□□ 0.25
DDX39A-217ENST00000592391 ATP9AO75110 1047 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 KCNA2P16389 499 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 PSEN2P49810 448 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 CHMP4BP1P59074 171 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 ARHGAP4P98171 946 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 ME3Q16798 604 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 CEP55Q53EZ4 464 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 MFSD5Q6N075 450 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 SESTD1Q86VW0 696 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 FAM177A1Q8N128 213 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-217ENST00000592391 PPP1R13LQ8WUF5 828 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 CRYGNQ8WXF5 182 aa16.58■□□□□ 0.24
DDX39A-217ENST00000592391 TRMT13Q9NUP7 481 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms