RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SPICE1Q8N0Z3 855 aa17.54■□□□□ 0.4
MBD1-227ENST00000592060 RETREG2Q8NC44 543 aa17.54■□□□□ 0.4
MBD1-227ENST00000592060 ACER1Q8TDN7 264 aa17.54■□□□□ 0.4
MBD1-227ENST00000592060 ARID3AQ99856 593 aa17.54■□□□□ 0.4
MBD1-227ENST00000592060 NUP58Q9BVL2 599 aa17.54■□□□□ 0.4
MBD1-227ENST00000592060 ZBTB21Q9ULJ3 1066 aa17.54■□□□□ 0.4
MBD1-227ENST00000592060 KIAA1024Q9UPX6 916 aa17.54■□□□□ 0.4
MBD1-227ENST00000592060 RBBP6Q7Z6E9 1792 aaKnown RBP17.54■□□□□ 0.4
MBD1-227ENST00000592060 SPDYE3A6NKU9 549 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 MED24O75448 989 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 PLA2G4BP0C869 781 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 KLK7P49862 253 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 ZCWPW2Q504Y3 356 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 PRR16Q569H4 304 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 CARD6Q9BX69 1037 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 REXO2Q9Y3B8 237 aaKnown RBP17.53■□□□□ 0.4
MBD1-227ENST00000592060 FAM86B1E9PN63 330 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 FAM86B2P0C5J1 330 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 STAT2P52630 851 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 FIGNQ5HY92 759 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 FBXO38Q6PIJ6 1188 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 MTMR14Q8NCE2 650 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 VPS33BQ9H267 617 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 PANK4Q9NVE7 773 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
MBD1-227ENST00000592060 PCDHA2Q9Y5H9 948 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 ATAD5Q96QE3 1844 aa17.53■□□□□ 0.4
MBD1-227ENST00000592060 A0A1W2PQJ5 194 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 KIF5CO60282 957 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 NDUFA10O95299 355 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 CYP3A4P08684 503 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 CYP11B2P19099 503 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 LRRC41Q15345 812 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 FAM26FQ5R3K3 315 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 HAUS3Q68CZ6 603 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 MYOCDQ8IZQ8 938 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 MNS1Q8NEH6 495 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 SLF1Q9BQI6 1058 aa17.52■□□□□ 0.4
MBD1-227ENST00000592060 FRMD3A2A2Y4 597 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 TBC1D12O60347 775 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 FGFR1OPO95684 399 aaKnown RBP17.51■□□□□ 0.39
MBD1-227ENST00000592060 H2AFXP16104 143 aaPredicted RBP17.51■□□□□ 0.39
MBD1-227ENST00000592060 SLC12A3P55017 1021 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 ZBED6P86452 979 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 MAN2A1Q16706 1144 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 VWA3BQ502W6 1294 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 FAM83BQ5T0W9 1011 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 GPBP1Q86WP2 473 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 TEX2Q8IWB9 1127 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 ZBED3Q96IU2 234 aaPredicted RBP17.51■□□□□ 0.39
MBD1-227ENST00000592060 FAM20AQ96MK3 541 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 FGFBP2Q9BYJ0 223 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 GOPCQ9HD26 462 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 AGPAT5Q9NUQ2 364 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 SIK3Q9Y2K2 1263 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 EPN1Q9Y6I3 576 aaPredicted RBP17.51■□□□□ 0.39
MBD1-227ENST00000592060 POTEFA5A3E0 1075 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 ABL1P00519 1130 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 SSBP05455 408 aaKnown RBP eCLIP17.51■□□□□ 0.39
MBD1-227ENST00000592060 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 HOXA13P31271 388 aaPredicted RBP17.51■□□□□ 0.39
MBD1-227ENST00000592060 ARHGAP29Q52LW3 1261 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 FKBP15Q5T1M5 1219 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 POTEGQ6S5H5 508 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 POTEEQ6S8J3 1075 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 CCDC65Q8IXS2 484 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 OGFOD1Q8N543 542 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 TSG101Q99816 390 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 BMP2KQ9NSY1 1161 aaPredicted RBP17.51■□□□□ 0.39
MBD1-227ENST00000592060 PGAP2Q9UHJ9 254 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 VAV3Q9UKW4 847 aa17.51■□□□□ 0.39
MBD1-227ENST00000592060 MSH4O15457 936 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 SPATA31C1P0DKV0 1188 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 TRIM21P19474 475 aaKnown RBP17.5■□□□□ 0.39
MBD1-227ENST00000592060 ARSHQ5FYA8 562 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 FAM83AQ86UY5 434 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 CATSPER3Q86XQ3 398 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 AGBL3Q8NEM8 1001 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 IQCDQ96DY2 449 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 RANBP17Q9H2T7 1088 aaKnown RBP17.5■□□□□ 0.39
MBD1-227ENST00000592060 NDST4Q9H3R1 872 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 ZNRF3Q9ULT6 936 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 PITPNM2Q9BZ72 1349 aa17.5■□□□□ 0.39
MBD1-227ENST00000592060 NPHP3-ACAD11A0A0J9YXS1 232 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 RPA1P27694 616 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 PPP2R3AQ06190 1150 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 KIF4BQ2VIQ3 1234 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 ZNF569Q5MCW4 686 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 NCAPH2Q6IBW4 605 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 ERMNQ8TAM6 284 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 TMEM39BQ9GZU3 492 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 VCPKMTQ9H867 229 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 MYO1AQ9UBC5 1043 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 FER1L6Q2WGJ9 1857 aa17.49■□□□□ 0.39
MBD1-227ENST00000592060 BRCA1P38398 1863 aaKnown RBP17.49■□□□□ 0.39
MBD1-227ENST00000592060 IGLV3-22A0A075B6J6 115 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms