RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 GOLGA6DP0CG33 693 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 IRAK1P51617 712 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 TRIM14Q14142 442 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 ZYXQ15942 572 aaKnown RBP17.25■□□□□ 0.35
CXXC1-214ENST00000590901 ASPRV1Q53RT3 343 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 SAMD7Q7Z3H4 446 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 DAGLBQ8NCG7 672 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 RPGRIP1Q96KN7 1286 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 MMS19Q96T76 1030 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 GOLGA6AQ9NYA3 693 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 GUCA1BQ9UMX6 200 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 CCNT1O60563 726 aaKnown RBP17.25■□□□□ 0.35
CXXC1-214ENST00000590901 NDUFB10O96000 172 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 CCT6AP40227 531 aaKnown RBP17.25■□□□□ 0.35
CXXC1-214ENST00000590901 SLC1A4P43007 532 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 PTGER2P43116 358 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 MMP14P50281 582 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 GSCP56915 257 aaPredicted RBP17.25■□□□□ 0.35
CXXC1-214ENST00000590901 CKAP4Q07065 602 aaKnown RBP17.25■□□□□ 0.35
CXXC1-214ENST00000590901 OGFOD1Q8N543 542 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 PAGE5Q96GU1 130 aa17.25■□□□□ 0.35
CXXC1-214ENST00000590901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.25■□□□□ 0.35
CXXC1-214ENST00000590901 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
CXXC1-214ENST00000590901 MYO3BQ8WXR4 1341 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 ENTPD3O75355 529 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 TDP2O95551 362 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 USP8P40818 1118 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 NT5C2P49902 561 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 PPFIA1Q13136 1202 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 SPDYE2Q495Y8 402 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 CCDC17Q96LX7 622 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 TAOK3Q9H2K8 898 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 KANSL2Q9H9L4 492 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 AGPSO00116 658 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 N4BP3O15049 544 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 SLC37A4O43826 429 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 TGFB2P61812 414 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 KRT31Q15323 416 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 QRICH1Q2TAL8 776 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 PRAMEF18Q5VWM3 479 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 POTEDQ86YR6 584 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 SELENOOQ9BVL4 669 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 HDAC6Q9UBN7 1215 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 LIMA1Q9UHB6 759 aaKnown RBP17.24■□□□□ 0.35
CXXC1-214ENST00000590901 SAR1BQ9Y6B6 198 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 FER1L6Q2WGJ9 1857 aa17.24■□□□□ 0.35
CXXC1-214ENST00000590901 PPP1R3GB7ZBB8 358 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 RNF225M0QZC1 329 aaPredicted RBP17.23■□□□□ 0.35
CXXC1-214ENST00000590901 HNRNPH1P31943 449 aaKnown RBP17.23■□□□□ 0.35
CXXC1-214ENST00000590901 NAALADL2Q58DX5 795 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 MKL1Q969V6 931 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 GDAP1L1Q96MZ0 367 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 TRIM10Q9UDY6 481 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 PGAP2Q9UHJ9 254 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 REXO2Q9Y3B8 237 aaKnown RBP17.23■□□□□ 0.35
CXXC1-214ENST00000590901 EPN1Q9Y6I3 576 aaPredicted RBP17.23■□□□□ 0.35
CXXC1-214ENST00000590901 KRT9P35527 623 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 DPYDQ12882 1025 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 FERMT2Q96AC1 680 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
CXXC1-214ENST00000590901 PNMA6FA0A0J9YX94 578 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 GOLGA6BA6NDN3 693 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 ENC1O14682 589 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 NDUFA10O95299 355 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 ATP1A1P05023 1023 aaKnown RBP17.22■□□□□ 0.35
CXXC1-214ENST00000590901 TRAPPC10P48553 1259 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 PAPD7Q5XG87 772 aaKnown RBP17.22■□□□□ 0.35
CXXC1-214ENST00000590901 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
CXXC1-214ENST00000590901 CCNI2Q6ZMN8 369 aaPredicted RBP17.22■□□□□ 0.35
CXXC1-214ENST00000590901 SH3RF1Q7Z6J0 888 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 REXO1Q8N1G1 1221 aaKnown RBP17.22■□□□□ 0.35
CXXC1-214ENST00000590901 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 CTNND2Q9UQB3 1225 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
CXXC1-214ENST00000590901 ZMYND10O75800 440 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 POLD1P28340 1107 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 MNAT1P51948 309 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
CXXC1-214ENST00000590901 PDXDC2PQ6P474 469 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 GBP6Q6ZN66 633 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 TMEM179Q6ZVK1 233 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 GSPT2Q8IYD1 628 aaKnown RBP17.22■□□□□ 0.35
CXXC1-214ENST00000590901 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 GSDMAQ96QA5 445 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 CAPS2Q9BXY5 557 aa17.22■□□□□ 0.35
CXXC1-214ENST00000590901 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
CXXC1-214ENST00000590901 ZBTB5O15062 677 aa17.21■□□□□ 0.35
CXXC1-214ENST00000590901 INPP5BP32019 993 aa17.21■□□□□ 0.35
CXXC1-214ENST00000590901 NONOQ15233 471 aaKnown RBP eCLIP17.21■□□□□ 0.35
CXXC1-214ENST00000590901 USH1GQ495M9 461 aa17.21■□□□□ 0.35
CXXC1-214ENST00000590901 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
CXXC1-214ENST00000590901 CIAPIN1Q6FI81 312 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms