RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 DNAJC10Q8IXB1 793 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 SPIRE2Q8WWL2 714 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 CELF4Q9BZC1 486 aaKnown RBP16.67■□□□□ 0.26
CIRBP-228ENST00000590347 OCEL1Q9H607 264 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 ZSWIM5Q9P217 1185 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 ATP8A1Q9Y2Q0 1164 aa16.67■□□□□ 0.26
CIRBP-228ENST00000590347 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 DAPK3O43293 454 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 SESN3P58005 492 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 ZNF507Q8TCN5 953 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 KLHL29Q96CT2 875 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 PURBQ96QR8 312 aaKnown RBP16.66■□□□□ 0.26
CIRBP-228ENST00000590347 PRMT1Q99873 361 aaKnown RBP16.66■□□□□ 0.26
CIRBP-228ENST00000590347 SYT15Q9BQS2 421 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 KANSL2Q9H9L4 492 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 hCG_2014768A0A024R1R8 64 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 SEMA3EO15041 775 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 ADAMTS3O15072 1205 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 TRIM22Q8IYM9 498 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 XPO6Q96QU8 1125 aaKnown RBP16.66■□□□□ 0.26
CIRBP-228ENST00000590347 EXOC1Q9NV70 894 aa16.66■□□□□ 0.26
CIRBP-228ENST00000590347 NQO1P15559 274 aaKnown RBP16.65■□□□□ 0.26
CIRBP-228ENST00000590347 ITGA6P23229 1130 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 COPB2P35606 906 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 IGHMBP2P38935 993 aaKnown RBP16.65■□□□□ 0.26
CIRBP-228ENST00000590347 ADCY1Q08828 1119 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 MARCH10Q8NA82 808 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-228ENST00000590347 IGDCC4Q8TDY8 1250 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 RPS6KC1Q96S38 1066 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
CIRBP-228ENST00000590347 KDM4CQ9H3R0 1056 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 CPDO75976 1380 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 OVOS2A0A0G2JMS6 1433 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-228ENST00000590347 ORC4O43929 436 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 RFC5P40937 340 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 SLC5A9Q2M3M2 681 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 TRPM8Q7Z2W7 1104 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 RETREG2Q8NC44 543 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 TACC3Q9Y6A5 838 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 LMTK3Q96Q04 1460 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 H0YGN5 161 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 KCNK3O14649 394 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 DCCP43146 1447 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 KIF1AQ12756 1690 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-228ENST00000590347 MEA1Q16626 185 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 RTN1Q16799 776 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 PIGBQ92521 554 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 NAF1Q96HR8 494 aaKnown RBP16.65■□□□□ 0.26
CIRBP-228ENST00000590347 NFS1Q9Y697 457 aa16.65■□□□□ 0.26
CIRBP-228ENST00000590347 NCALDP61601 193 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 ANKS4BQ8N8V4 417 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 DRAXINQ8NBI3 349 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-228ENST00000590347 PHC3Q8NDX5 983 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 LRRC53A6NM62 1247 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 FMNL1O95466 1100 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-228ENST00000590347 ZBED6P86452 979 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 SYCP3Q8IZU3 236 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 AATFQ9NY61 560 aaKnown RBP eCLIP16.64■□□□□ 0.25
CIRBP-228ENST00000590347 ADAM22Q9P0K1 906 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 AMACRQ9UHK6 382 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 GGA2Q9UJY4 613 aa16.64■□□□□ 0.25
CIRBP-228ENST00000590347 CEP104O60308 925 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 RNF8O76064 485 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 FESP07332 822 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 ATP2A2P16615 1042 aaKnown RBP16.63■□□□□ 0.25
CIRBP-228ENST00000590347 IFI35P80217 286 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-228ENST00000590347 ANO7Q6IWH7 933 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 CNOT6LQ96LI5 555 aaKnown RBP16.63■□□□□ 0.25
CIRBP-228ENST00000590347 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.63■□□□□ 0.25
CIRBP-228ENST00000590347 HOMER3Q9NSC5 361 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 DLGAP2Q9P1A6 1054 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-228ENST00000590347 ITGA4P13612 1032 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 KIF5BP33176 963 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 PRPHP41219 470 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 ERFP50548 548 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 HHATQ5VTY9 493 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 OTUD6AQ7L8S5 288 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
CIRBP-228ENST00000590347 HSPA9P38646 679 aaKnown RBP16.63■□□□□ 0.25
CIRBP-228ENST00000590347 TRIM4Q9C037 500 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 SLC12A4Q9UP95 1085 aa16.63■□□□□ 0.25
CIRBP-228ENST00000590347 MYH6P13533 1939 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 UTYO14607 1347 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 STK36Q9NRP7 1315 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 H7C1W4 665 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 AHCYL1O43865 530 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 ECHS1P30084 290 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 ZNF658Q5TYW1 1059 aaPredicted RBP16.62■□□□□ 0.25
CIRBP-228ENST00000590347 TMEM154Q6P9G4 183 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 CD302Q8IX05 232 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 UCMAQ8WVF2 138 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms