RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 EYSQ5T1H1 3165 aa22.33■■□□□ 1.16
PTBP1-215ENST00000589883 CPLX1O14810 134 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 PTGS1P23219 599 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 EDNRBP24530 442 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 PBX2P40425 430 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 TTLL4Q14679 1199 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 TMEM63BQ5T3F8 832 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 OTOP2Q7RTS6 562 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 PHKBQ93100 1093 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 AMNQ9BXJ7 453 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 SLC28A3Q9HAS3 691 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 SLC4A7Q9Y6M7 1214 aa22.32■■□□□ 1.16
PTBP1-215ENST00000589883 V9GY48 417 aaPredicted RBP22.32■■□□□ 1.16
PTBP1-215ENST00000589883 CD2BP2O95400 341 aaKnown RBP22.31■■□□□ 1.16
PTBP1-215ENST00000589883 NTRK3Q16288 839 aa22.31■■□□□ 1.16
PTBP1-215ENST00000589883 MCF2L2Q86YR7 1114 aa22.31■■□□□ 1.16
PTBP1-215ENST00000589883 ABCB11O95342 1321 aa22.31■■□□□ 1.16
PTBP1-215ENST00000589883 UMODL1Q5DID0 1318 aa22.31■■□□□ 1.16
PTBP1-215ENST00000589883 PRUNE2Q8WUY3 3088 aa22.3■■□□□ 1.16
PTBP1-215ENST00000589883 DTNBO60941 627 aa22.3■■□□□ 1.16
PTBP1-215ENST00000589883 TXNP10599 105 aaKnown RBP22.3■■□□□ 1.16
PTBP1-215ENST00000589883 PTPN11Q06124 597 aaPredicted RBP22.3■■□□□ 1.16
PTBP1-215ENST00000589883 FAM47CQ5HY64 1035 aa22.3■■□□□ 1.16
PTBP1-215ENST00000589883 NFRKBQ6P4R8 1299 aa22.3■■□□□ 1.16
PTBP1-215ENST00000589883 SLC26A6Q9BXS9 759 aa22.3■■□□□ 1.16
PTBP1-215ENST00000589883 WNT8AQ9H1J5 351 aa22.3■■□□□ 1.16
PTBP1-215ENST00000589883 TRMT13Q9NUP7 481 aaKnown RBP22.3■■□□□ 1.16
PTBP1-215ENST00000589883 CXXC1Q9P0U4 656 aaPredicted RBP22.3■■□□□ 1.16
PTBP1-215ENST00000589883 PCDHA1Q9Y5I3 950 aa22.3■■□□□ 1.16
PTBP1-215ENST00000589883 A6NJR5 290 aa22.29■■□□□ 1.16
PTBP1-215ENST00000589883 ACTN1P12814 892 aa22.29■■□□□ 1.16
PTBP1-215ENST00000589883 RFC2P35250 354 aa22.29■■□□□ 1.16
PTBP1-215ENST00000589883 CPLX2Q6PUV4 134 aaKnown RBP22.29■■□□□ 1.16
PTBP1-215ENST00000589883 GTF3C6Q969F1 213 aa22.29■■□□□ 1.16
PTBP1-215ENST00000589883 ZBBXA8MT70 800 aa22.28■■□□□ 1.16
PTBP1-215ENST00000589883 IFNAR1P17181 557 aa22.28■■□□□ 1.16
PTBP1-215ENST00000589883 AKAP17AQ02040 695 aaKnown RBP22.28■■□□□ 1.16
PTBP1-215ENST00000589883 HEATR3Q7Z4Q2 680 aa22.28■■□□□ 1.16
PTBP1-215ENST00000589883 RETREG2Q8NC44 543 aa22.28■■□□□ 1.16
PTBP1-215ENST00000589883 NSUN6Q8TEA1 469 aaKnown RBP22.28■■□□□ 1.16
PTBP1-215ENST00000589883 GPKOWQ92917 476 aaPredicted RBP eCLIP22.28■■□□□ 1.16
PTBP1-215ENST00000589883 PRDM12Q9H4Q4 367 aa22.28■■□□□ 1.16
PTBP1-215ENST00000589883 NOD1Q9Y239 953 aa22.28■■□□□ 1.16
PTBP1-215ENST00000589883 MRPL11Q9Y3B7 192 aaKnown RBP22.28■■□□□ 1.16
PTBP1-215ENST00000589883 SCN10AQ9Y5Y9 1956 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 CYP2C9P11712 490 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 SSRP1Q08945 709 aaKnown RBP22.27■■□□□ 1.16
PTBP1-215ENST00000589883 ST3GAL1Q11201 340 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 NBPF20Q3BBV1 942 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 TJAP1Q5JTD0 557 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 CCDC83Q8IWF9 413 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 SCLYQ96I15 445 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 ZSCAN31Q96LW9 406 aaPredicted RBP22.27■■□□□ 1.16
PTBP1-215ENST00000589883 IWS1Q96ST2 819 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 NKX2-4Q9H2Z4 354 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 PCDHA11Q9Y5I1 949 aa22.27■■□□□ 1.16
PTBP1-215ENST00000589883 PITPNM1O00562 1244 aa22.26■■□□□ 1.15
PTBP1-215ENST00000589883 PRPF3O43395 683 aaKnown RBP22.26■■□□□ 1.15
PTBP1-215ENST00000589883 BFSP2Q13515 415 aa22.26■■□□□ 1.15
PTBP1-215ENST00000589883 TRIM22Q8IYM9 498 aa22.26■■□□□ 1.15
PTBP1-215ENST00000589883 IL27Q8NEV9 243 aa22.26■■□□□ 1.15
PTBP1-215ENST00000589883 RNF26Q9BY78 433 aaPredicted RBP22.26■■□□□ 1.15
PTBP1-215ENST00000589883 SH2B1Q9NRF2 756 aaPredicted RBP22.26■■□□□ 1.15
PTBP1-215ENST00000589883 VCANP13611 3396 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 CDKL5O76039 1030 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 CTDNEP1O95476 244 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 ATP2A2P16615 1042 aaKnown RBP22.25■■□□□ 1.15
PTBP1-215ENST00000589883 TRAF1Q13077 416 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 STXBP2Q15833 593 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 WWC2Q6AWC2 1192 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 CCDC155Q8N6L0 562 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 TBC1D5Q92609 795 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 MYH6P13533 1939 aa22.25■■□□□ 1.15
PTBP1-215ENST00000589883 GH1P01241 217 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 SCG2P13521 617 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 IGFBP4P22692 258 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 MCM2P49736 904 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 PKN1Q16512 942 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 PFKFB3Q16875 520 aaPredicted RBP22.24■■□□□ 1.15
PTBP1-215ENST00000589883 PPP2R2DQ66LE6 453 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 DEFB128Q7Z7B8 93 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 USP38Q8NB14 1042 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 SYTL5Q8TDW5 730 aaPredicted RBP22.24■■□□□ 1.15
PTBP1-215ENST00000589883 ATXN2LQ8WWM7 1075 aaKnown RBP22.24■■□□□ 1.15
PTBP1-215ENST00000589883 PPM1EQ8WY54 764 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 COPS5Q92905 334 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 RMDN3Q96TC7 470 aa22.24■■□□□ 1.15
PTBP1-215ENST00000589883 TSPYL2Q9H2G4 693 aaPredicted RBP22.24■■□□□ 1.15
PTBP1-215ENST00000589883 OPLAHO14841 1288 aa22.23■■□□□ 1.15
PTBP1-215ENST00000589883 ARHGEF16Q5VV41 709 aa22.23■■□□□ 1.15
PTBP1-215ENST00000589883 CCDC62Q6P9F0 684 aa22.23■■□□□ 1.15
PTBP1-215ENST00000589883 SEPT14Q6ZU15 432 aa22.23■■□□□ 1.15
PTBP1-215ENST00000589883 TMX3Q96JJ7 454 aa22.23■■□□□ 1.15
PTBP1-215ENST00000589883 YBX2Q9Y2T7 364 aaKnown RBP22.23■■□□□ 1.15
PTBP1-215ENST00000589883 STXBP3O00186 592 aa22.22■■□□□ 1.15
PTBP1-215ENST00000589883 JAK2O60674 1132 aa22.22■■□□□ 1.15
PTBP1-215ENST00000589883 CFBP00751 764 aa22.22■■□□□ 1.15
PTBP1-215ENST00000589883 IQCF3P0C7M6 154 aa22.22■■□□□ 1.15
PTBP1-215ENST00000589883 NAPAP54920 295 aa22.22■■□□□ 1.15
PTBP1-215ENST00000589883 TYW1BQ6NUM6 668 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms