RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ZNF76P36508 570 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 UBASH3AP57075 661 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 ASIC1P78348 528 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 DGKZQ13574 1117 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 MTMR2Q13614 643 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 DHX8Q14562 1220 aaKnown RBP9.83□□□□□ -0.84
SMAD4-206ENST00000588860 MCM6Q14566 821 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 TPD52L1Q16890 204 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-206ENST00000588860 KMT5BQ4FZB7 885 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 Q4G0T1 1027 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 TMEM119Q4V9L6 283 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 PRR16Q569H4 304 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 HSP90AA4PQ58FG1 418 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 SPATA1Q5VX52 437 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 TMC6Q7Z403 805 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 LDHDQ86WU2 507 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 TEX2Q8IWB9 1127 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 SLFN12Q8IYM2 578 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 CRYGNQ8WXF5 182 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 RAD54LQ92698 747 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 C7orf25Q9BPX7 421 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 AS3MTQ9HBK9 375 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 KCNMB3Q9NPA1 279 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 ZNF112Q9UJU3 913 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 PCDHA12Q9UN75 941 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 GDAQ9Y2T3 454 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 PPP2R3BQ9Y5P8 575 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 DOCK5Q9H7D0 1870 aa9.83□□□□□ -0.84
SMAD4-206ENST00000588860 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
SMAD4-206ENST00000588860 KDM3AQ9Y4C1 1321 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 LCTP09848 1927 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 KLRC4O43908 158 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 FLOT1O75955 427 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 ICAM1P05362 532 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 CYP3A4P08684 503 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 VCAM1P19320 739 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 CDK11BP21127 795 aaKnown RBP9.82□□□□□ -0.84
SMAD4-206ENST00000588860 CCT6AP40227 531 aaKnown RBP9.82□□□□□ -0.84
SMAD4-206ENST00000588860 STAT3P40763 770 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 HIRAP54198 1017 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-206ENST00000588860 USP14P54578 494 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 AMPD3Q01432 767 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 PAK1Q13153 545 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 STIM1Q13586 685 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 KCNB1Q14721 858 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 SV2BQ7L1I2 683 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 FILIP1Q7Z7B0 1213 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 PRPF38AQ8NAV1 312 aaKnown RBP9.82□□□□□ -0.84
SMAD4-206ENST00000588860 ETNPPLQ8TBG4 499 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 NELFBQ8WX92 580 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 ZKSCAN4Q969J2 545 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-206ENST00000588860 AGBL1Q96MI9 1066 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 MED15Q96RN5 788 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 WDR18Q9BV38 432 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 RPAP3Q9H6T3 665 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-206ENST00000588860 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 BLOC1S4Q9NUP1 217 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 EXOC1Q9NV70 894 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 IMPACTQ9P2X3 320 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 PYCARDQ9ULZ3 195 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 CTDP1Q9Y5B0 961 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-206ENST00000588860 SCN4AP35499 1836 aa9.82□□□□□ -0.84
SMAD4-206ENST00000588860 POTECB2RU33 542 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 FAM86B1E9PN63 330 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 TBX3O15119 743 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 SLC26A4O43511 780 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 COBLO75128 1261 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 DDNO94850 711 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-206ENST00000588860 RHOBTB3O94955 611 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 FAM86B2P0C5J1 330 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 ZNF18P17022 549 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 PTPRAP18433 802 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 CIITAP33076 1130 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 PRCPP42785 496 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 GSDMDP57764 484 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 PDE4DQ08499 809 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 LRMPQ12912 555 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 SPP2Q13103 211 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 SEMA3FQ13275 785 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 SUPT20HL1Q3ZLR7 823 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 NCAPH2Q6IBW4 605 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 C17orf53Q8N3J3 647 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-206ENST00000588860 ZNF280CQ8ND82 737 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 ERMNQ8TAM6 284 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 CACTINQ8WUQ7 758 aaKnown RBP9.81□□□□□ -0.84
SMAD4-206ENST00000588860 TBC1D5Q92609 795 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 LARP4BQ92615 738 aaKnown RBP9.81□□□□□ -0.84
SMAD4-206ENST00000588860 NUDT12Q9BQG2 462 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 TRIM9Q9C026 710 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 LRRC27Q9C0I9 530 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 SAMSN1Q9NSI8 373 aaKnown RBP9.81□□□□□ -0.84
SMAD4-206ENST00000588860 RWDD2AQ9UIY3 292 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 PPP1R9AQ9ULJ8 1098 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 FZD1Q9UP38 647 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 A0A0G2JMZ2 1700 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 ZNF536O15090 1300 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 PITPNM2Q9BZ72 1349 aa9.81□□□□□ -0.84
SMAD4-206ENST00000588860 MYMKA6NI61 221 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 MSH4O15457 936 aa9.8□□□□□ -0.84
SMAD4-206ENST00000588860 ZBED4O75132 1171 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms