RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 F2P00734 622 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-208ENST00000588692 FUT2Q10981 343 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 TMEM240Q5SV17 173 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 Q6ZUG5 572 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 C16orf59Q7L2K0 433 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 WNT8AQ9H1J5 351 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 NOD1Q9Y239 953 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 NID2Q14112 1375 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 SPDYE3A6NKU9 549 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 SPATA31C2B4DYI2 1134 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 CYP2C9P11712 490 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 METAP2P50579 478 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX39A-208ENST00000588692 SP2Q02086 613 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 NEDD9Q14511 834 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 HSDL1Q3SXM5 330 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 ZNF697Q5TEC3 545 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 Q7L0L9 218 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 NLRX1Q86UT6 975 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 RPUSD2Q8IZ73 545 aaKnown RBP16.6■□□□□ 0.25
DDX39A-208ENST00000588692 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.25
DDX39A-208ENST00000588692 BRF1Q92994 677 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 MTIF3Q9H2K0 278 aaKnown RBP16.6■□□□□ 0.25
DDX39A-208ENST00000588692 MLXIPQ9HAP2 919 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 MTMR10Q9NXD2 777 aa16.6■□□□□ 0.25
DDX39A-208ENST00000588692 TMEM265A0A087WTH1 108 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-208ENST00000588692 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-208ENST00000588692 PFKMP08237 780 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 CPA1P15085 419 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 PSEN2P49810 448 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 CCL23P55773 120 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 CHMP4BP1P59074 171 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 BFSP2Q13515 415 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 RASIP1Q5U651 963 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 ZNF365Q70YC5 407 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 CCDC155Q8N6L0 562 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 C7orf31Q8N865 590 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 ZFP91Q96JP5 570 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-208ENST00000588692 CDHR1Q96JP9 859 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 AGXT2Q9BYV1 514 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 GLT8D2Q9H1C3 349 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 EHMT1Q9H9B1 1298 aa16.59■□□□□ 0.25
DDX39A-208ENST00000588692 FAM217BQ9NTX9 383 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-208ENST00000588692 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-208ENST00000588692 DOCK5Q9H7D0 1870 aa16.58■□□□□ 0.25
DDX39A-208ENST00000588692 HAS3O00219 553 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 FGBP02675 491 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 ZNF286BP0CG31 522 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 ACRP10323 421 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 CDC27P30260 824 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 RFC2P35250 354 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 NAPAP54920 295 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 APOBRQ0VD83 1088 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 MFSD10Q14728 455 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 PTGISQ16647 500 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 KIAA0753Q2KHM9 967 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 METTL7BQ6UX53 244 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 GIMAP8Q8ND71 665 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-208ENST00000588692 HERVK_113Q902F9 699 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 GPRASP2Q96D09 838 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 SENP7Q9BQF6 1050 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 RTEL1Q9NZ71 1219 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 GTF2IRD1Q9UHL9 959 aa16.58■□□□□ 0.24
DDX39A-208ENST00000588692 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-208ENST00000588692 NOP56O00567 594 aaKnown RBP16.57■□□□□ 0.24
DDX39A-208ENST00000588692 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
DDX39A-208ENST00000588692 UBE2SQ16763 222 aa16.57■□□□□ 0.24
DDX39A-208ENST00000588692 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
DDX39A-208ENST00000588692 CAGE1Q8TC20 777 aa16.57■□□□□ 0.24
DDX39A-208ENST00000588692 RIC8AQ9NPQ8 531 aa16.57■□□□□ 0.24
DDX39A-208ENST00000588692 BARHL2Q9NY43 387 aa16.57■□□□□ 0.24
DDX39A-208ENST00000588692 STXBP3O00186 592 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 FOSP01100 380 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-208ENST00000588692 ADCY7P51828 1080 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 GDF6Q6KF10 455 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-208ENST00000588692 AFAP1L1Q8TED9 768 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 SCLYQ96I15 445 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 C16orf70Q9BSU1 422 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 ALG1Q9BT22 464 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 HDAC6Q9UBN7 1215 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 PCDHA6Q9UN73 950 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 STXBP5LQ9Y2K9 1186 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 PCDHA8Q9Y5H6 950 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 SCN5AQ14524 2016 aa16.56■□□□□ 0.24
DDX39A-208ENST00000588692 MAFGO15525 162 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 SORBS3O60504 671 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 ADD1P35611 737 aaKnown RBP16.55■□□□□ 0.24
DDX39A-208ENST00000588692 EVCP57679 992 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 RBL2Q08999 1139 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 TYW1BQ6NUM6 668 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 RUFY3Q7L099 469 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 USP26Q9BXU7 913 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 TM6SF1Q9BZW5 370 aa16.55■□□□□ 0.24
DDX39A-208ENST00000588692 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms