RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 IL23AQ9NPF7 189 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 UMODL1Q5DID0 1318 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 FIBPO43427 364 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 PPFIA4O75335 1185 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 ICAM3P32942 547 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 SMAD3P84022 425 aaKnown RBP22.46■■□□□ 1.19
TPM4-208ENST00000588410 SP2Q02086 613 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 NEDD9Q14511 834 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 UBE2SQ16763 222 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 TMEM240Q5SV17 173 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 WWC2Q6AWC2 1192 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 C7orf31Q8N865 590 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 RETREG2Q8NC44 543 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 KAT2BQ92831 832 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 EHMT1Q9H9B1 1298 aa22.46■■□□□ 1.19
TPM4-208ENST00000588410 SPATA31C2B4DYI2 1134 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 hCG_1984214I3L0E3 225 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 NOP56O00567 594 aaKnown RBP22.45■■□□□ 1.18
TPM4-208ENST00000588410 ZNF286BP0CG31 522 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 CDC27P30260 824 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 PSEN2P49810 448 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 MFSD10Q14728 455 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 PTGISQ16647 500 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 ZNF697Q5TEC3 545 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 FAM109BQ6ICB4 259 aaPredicted RBP22.45■■□□□ 1.18
TPM4-208ENST00000588410 PPP1R18Q6NYC8 613 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 ZNF365Q70YC5 407 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 C16orf59Q7L2K0 433 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 RPUSD2Q8IZ73 545 aaKnown RBP22.45■■□□□ 1.18
TPM4-208ENST00000588410 ZNF713Q8N859 430 aaPredicted RBP22.45■■□□□ 1.18
TPM4-208ENST00000588410 ALG1Q9BT22 464 aa22.45■■□□□ 1.18
TPM4-208ENST00000588410 MTIF3Q9H2K0 278 aaKnown RBP22.45■■□□□ 1.18
TPM4-208ENST00000588410 FGBP02675 491 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 FUT2Q10981 343 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 BFSP2Q13515 415 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 HSDL1Q3SXM5 330 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 SESTD1Q86VW0 696 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 CCDC155Q8N6L0 562 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 WNT8AQ9H1J5 351 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 FAM217BQ9NTX9 383 aaPredicted RBP22.44■■□□□ 1.18
TPM4-208ENST00000588410 PCDHA6Q9UN73 950 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 PCDHA8Q9Y5H6 950 aa22.44■■□□□ 1.18
TPM4-208ENST00000588410 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.43■■□□□ 1.18
TPM4-208ENST00000588410 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.43■■□□□ 1.18
TPM4-208ENST00000588410 F2P00734 622 aa22.43■■□□□ 1.18
TPM4-208ENST00000588410 ADD1P35611 737 aaKnown RBP22.43■■□□□ 1.18
TPM4-208ENST00000588410 ADCY7P51828 1080 aa22.43■■□□□ 1.18
TPM4-208ENST00000588410 KIAA0753Q2KHM9 967 aa22.43■■□□□ 1.18
TPM4-208ENST00000588410 SCLYQ96I15 445 aa22.43■■□□□ 1.18
TPM4-208ENST00000588410 CDHR1Q96JP9 859 aa22.43■■□□□ 1.18
TPM4-208ENST00000588410 USP26Q9BXU7 913 aa22.43■■□□□ 1.18
TPM4-208ENST00000588410 HOXD8P13378 290 aaPredicted RBP22.42■■□□□ 1.18
TPM4-208ENST00000588410 METTL7BQ6UX53 244 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 CYFIP1Q7L576 1253 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 TEX2Q8IWB9 1127 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 FBXL16Q8N461 479 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 GIMAP8Q8ND71 665 aaPredicted RBP22.42■■□□□ 1.18
TPM4-208ENST00000588410 GLT8D2Q9H1C3 349 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 RIC8AQ9NPQ8 531 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 MTMR10Q9NXD2 777 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 BARHL2Q9NY43 387 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 HDAC6Q9UBN7 1215 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 CYP46A1Q9Y6A2 500 aa22.42■■□□□ 1.18
TPM4-208ENST00000588410 MYH6P13533 1939 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 LAMA3Q16787 3333 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 BAZ2BQ9UIF8 2168 aaKnown RBP22.41■■□□□ 1.18
TPM4-208ENST00000588410 SMCO2A6NFE2 343 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 STXBP3O00186 592 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 PITPNM1O00562 1244 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 AKAP17AQ02040 695 aaKnown RBP22.41■■□□□ 1.18
TPM4-208ENST00000588410 SEMA3FQ13275 785 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 GDF6Q6KF10 455 aaPredicted RBP22.41■■□□□ 1.18
TPM4-208ENST00000588410 RUFY3Q7L099 469 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 HERVK_113Q902F9 699 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 GPRASP2Q96D09 838 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 FAM161BQ96MY7 647 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 SENP7Q9BQF6 1050 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 GTF2IRD1Q9UHL9 959 aa22.41■■□□□ 1.18
TPM4-208ENST00000588410 HAS3O00219 553 aa22.4■■□□□ 1.18
TPM4-208ENST00000588410 FOSP01100 380 aaPredicted RBP22.4■■□□□ 1.18
TPM4-208ENST00000588410 PFKMP08237 780 aa22.4■■□□□ 1.18
TPM4-208ENST00000588410 AGXT2Q9BYV1 514 aa22.4■■□□□ 1.18
TPM4-208ENST00000588410 BCAS3Q9H6U6 928 aa22.4■■□□□ 1.18
TPM4-208ENST00000588410 ZSWIM6Q9HCJ5 1215 aa22.4■■□□□ 1.18
TPM4-208ENST00000588410 RFC2P35250 354 aa22.39■■□□□ 1.17
TPM4-208ENST00000588410 SP4Q02446 784 aa22.39■■□□□ 1.17
TPM4-208ENST00000588410 PFKFB3Q16875 520 aaPredicted RBP22.39■■□□□ 1.17
TPM4-208ENST00000588410 TYW1BQ6NUM6 668 aa22.39■■□□□ 1.17
TPM4-208ENST00000588410 OTOP2Q7RTS6 562 aa22.39■■□□□ 1.17
TPM4-208ENST00000588410 DEFB128Q7Z7B8 93 aa22.39■■□□□ 1.17
TPM4-208ENST00000588410 CAGE1Q8TC20 777 aa22.39■■□□□ 1.17
TPM4-208ENST00000588410 LGALS2P05162 132 aa22.38■■□□□ 1.17
TPM4-208ENST00000588410 SCG2P13521 617 aa22.38■■□□□ 1.17
TPM4-208ENST00000588410 ITGB5P18084 799 aa22.38■■□□□ 1.17
TPM4-208ENST00000588410 MTMR1Q13613 665 aa22.38■■□□□ 1.17
TPM4-208ENST00000588410 RASIP1Q5U651 963 aa22.38■■□□□ 1.17
TPM4-208ENST00000588410 CCDC12Q8WUD4 166 aaPredicted RBP22.38■■□□□ 1.17
TPM4-208ENST00000588410 GPR20Q99678 358 aa22.38■■□□□ 1.17
TPM4-208ENST00000588410 C16orf70Q9BSU1 422 aa22.38■■□□□ 1.17
TPM4-208ENST00000588410 UBIAD1Q9Y5Z9 338 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms