RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 MRRFQ96E11 262 aaKnown RBP5.45□□□□□ -1.54
VPS4B-203ENST00000588323 CCDC140Q96MF4 163 aa5.45□□□□□ -1.54
VPS4B-203ENST00000588323 ZSWIM3Q96MP5 696 aa5.45□□□□□ -1.54
VPS4B-203ENST00000588323 CLIC6Q96NY7 704 aa5.45□□□□□ -1.54
VPS4B-203ENST00000588323 CCSER2Q9H7U1 834 aa5.45□□□□□ -1.54
VPS4B-203ENST00000588323 DTLQ9NZJ0 730 aa5.45□□□□□ -1.54
VPS4B-203ENST00000588323 ST6GALNAC2Q9UJ37 374 aa5.45□□□□□ -1.54
VPS4B-203ENST00000588323 H7BY64 318 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 SMAD7O15105 426 aaKnown RBP5.44□□□□□ -1.54
VPS4B-203ENST00000588323 AKAP8O43823 692 aaKnown RBP5.44□□□□□ -1.54
VPS4B-203ENST00000588323 B4GALT3O60512 393 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 CYP7B1O75881 506 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 SCG5P05408 212 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 ZNF28P17035 718 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 LTBRP36941 435 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 LSAMPQ13449 338 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 STEAP3Q658P3 488 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 FAM178BQ8IXR5 827 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 PPIL6Q8IXY8 311 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 ARRDC4Q8NCT1 418 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 KREMEN2Q8NCW0 462 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 RCBTB1Q8NDN9 531 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 KISS1RQ969F8 398 aaPredicted RBP5.44□□□□□ -1.54
VPS4B-203ENST00000588323 SSBP3Q9BWW4 388 aaPredicted RBP5.44□□□□□ -1.54
VPS4B-203ENST00000588323 TMEM168Q9H0V1 697 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 ACTR10Q9NZ32 417 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 SRRDQ9UH36 339 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 FBXL7Q9UJT9 491 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 PCDHB4Q9Y5E5 795 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 PCDHA2Q9Y5H9 948 aa5.44□□□□□ -1.54
VPS4B-203ENST00000588323 ARNTLO00327 626 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 SUSD5O60279 629 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 FSHBP01225 129 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 IL13P35225 146 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 SF1Q15637 639 aaKnown RBP5.43□□□□□ -1.54
VPS4B-203ENST00000588323 PRSS53Q2L4Q9 553 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 TNNI3KQ59H18 835 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 ACBD5Q5T8D3 534 aaPredicted RBP5.43□□□□□ -1.54
VPS4B-203ENST00000588323 WRNIP1Q96S55 665 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 CLDND1Q9NY35 253 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 CROTQ9UKG9 612 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 MRVI1Q9Y6F6 885 aa5.43□□□□□ -1.54
VPS4B-203ENST00000588323 TCRBV5S2A0A599 114 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 NPEPPSL1A6NEC2 478 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 B2RBV5 119 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 DGKIO75912 1065 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 DDAH1O94760 285 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 SSBP05455 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS4B-203ENST00000588323 ATF4P18848 351 aaPredicted RBP5.42□□□□□ -1.54
VPS4B-203ENST00000588323 TESK1Q15569 626 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 EMC4Q5J8M3 183 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 TEPPQ6URK8 271 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 YTHDC1Q96MU7 727 aaKnown RBP5.42□□□□□ -1.54
VPS4B-203ENST00000588323 TMEM209Q96SK2 561 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 EPB41L1Q9H4G0 881 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 CAPN10Q9HC96 672 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 JADE2Q9NQC1 790 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 FTSJ1Q9UET6 329 aa5.42□□□□□ -1.54
VPS4B-203ENST00000588323 TADA3O75528 432 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 LCP1P13796 627 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 GFRA1P56159 465 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 VPS37DQ86XT2 251 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 TMEM145Q8NBT3 493 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 SLC16A11Q8NCK7 471 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 SH3RF3Q8TEJ3 882 aaPredicted RBP5.41□□□□□ -1.54
VPS4B-203ENST00000588323 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS4B-203ENST00000588323 PPP4R1LQ9P1A2 415 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 MYOTQ9UBF9 498 aa5.41□□□□□ -1.54
VPS4B-203ENST00000588323 MAFKO60675 156 aa5.4□□□□□ -1.54
VPS4B-203ENST00000588323 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.54
VPS4B-203ENST00000588323 PPP2CBP62714 309 aa5.4□□□□□ -1.54
VPS4B-203ENST00000588323 PPP2CAP67775 309 aa5.4□□□□□ -1.54
VPS4B-203ENST00000588323 TRMT10BQ6PF06 316 aaKnown RBP5.4□□□□□ -1.54
VPS4B-203ENST00000588323 SPRED1Q7Z699 444 aa5.4□□□□□ -1.54
VPS4B-203ENST00000588323 CIR1Q86X95 450 aaPredicted RBP5.4□□□□□ -1.54
VPS4B-203ENST00000588323 KBTBD2Q8IY47 623 aa5.4□□□□□ -1.54
VPS4B-203ENST00000588323 PHOSPHO1Q8TCT1 267 aa5.4□□□□□ -1.54
VPS4B-203ENST00000588323 MBD6Q96DN6 1003 aa5.4□□□□□ -1.54
VPS4B-203ENST00000588323 TSC22D4Q9Y3Q8 395 aa5.4□□□□□ -1.54
VPS4B-203ENST00000588323 AGRPO00253 132 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 KRIT1O00522 736 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 LRG1P02750 347 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 C6P13671 934 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 EPHB4P54760 987 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 ICAM4Q14773 271 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 FXNQ16595 210 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 DENND5AQ6IQ26 1287 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 PKN3Q6P5Z2 889 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 TMC5Q6UXY8 1006 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 KLHL36Q8N4N3 616 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 IGDCC4Q8TDY8 1250 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 CDK5RAP1Q96SZ6 601 aaKnown RBP5.39□□□□□ -1.55
VPS4B-203ENST00000588323 KLC2Q9H0B6 622 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 SMOC1Q9H4F8 434 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 BARX1Q9HBU1 254 aaPredicted RBP5.39□□□□□ -1.55
VPS4B-203ENST00000588323 KIAA1522Q9P206 1035 aaPredicted RBP5.39□□□□□ -1.55
VPS4B-203ENST00000588323 PRKAG3Q9UGI9 489 aa5.39□□□□□ -1.55
VPS4B-203ENST00000588323 B4GALT4O60513 344 aa5.38□□□□□ -1.55
VPS4B-203ENST00000588323 TACR2P21452 398 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms