RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ANKRD1Q15327 319 aa22.02■■□□□ 1.12
CIRBP-217ENST00000588230 PCNX4Q63HM2 1172 aa22.02■■□□□ 1.12
CIRBP-217ENST00000588230 CPLX2Q6PUV4 134 aaKnown RBP22.02■■□□□ 1.12
CIRBP-217ENST00000588230 RNF26Q9BY78 433 aaPredicted RBP22.02■■□□□ 1.12
CIRBP-217ENST00000588230 EHMT1Q9H9B1 1298 aa22.02■■□□□ 1.12
CIRBP-217ENST00000588230 RTEL1Q9NZ71 1219 aa22.02■■□□□ 1.12
CIRBP-217ENST00000588230 PCDHA6Q9UN73 950 aa22.02■■□□□ 1.12
CIRBP-217ENST00000588230 PCDHA8Q9Y5H6 950 aa22.02■■□□□ 1.12
CIRBP-217ENST00000588230 PSMC6P62333 389 aa22.01■■□□□ 1.11
CIRBP-217ENST00000588230 PURAQ00577 322 aaKnown RBP22.01■■□□□ 1.11
CIRBP-217ENST00000588230 ITGA7Q13683 1181 aa22.01■■□□□ 1.11
CIRBP-217ENST00000588230 LAMC2Q13753 1193 aa22.01■■□□□ 1.11
CIRBP-217ENST00000588230 SHHQ15465 462 aa22.01■■□□□ 1.11
CIRBP-217ENST00000588230 PKN1Q16512 942 aa22.01■■□□□ 1.11
CIRBP-217ENST00000588230 DHX37Q8IY37 1157 aaKnown RBP22.01■■□□□ 1.11
CIRBP-217ENST00000588230 TRIM22Q8IYM9 498 aa22.01■■□□□ 1.11
CIRBP-217ENST00000588230 CCDC12Q8WUD4 166 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-217ENST00000588230 AFG1LQ8WV93 481 aa22.01■■□□□ 1.11
CIRBP-217ENST00000588230 MTG1Q9BT17 334 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-217ENST00000588230 COL6A3P12111 3177 aa22■■□□□ 1.11
CIRBP-217ENST00000588230 FOSP01100 380 aaPredicted RBP22■■□□□ 1.11
CIRBP-217ENST00000588230 RAG1P15918 1043 aa22■■□□□ 1.11
CIRBP-217ENST00000588230 NEK4P51957 841 aa22■■□□□ 1.11
CIRBP-217ENST00000588230 SSRP1Q08945 709 aaKnown RBP22■■□□□ 1.11
CIRBP-217ENST00000588230 GPR153Q6NV75 609 aa22■■□□□ 1.11
CIRBP-217ENST00000588230 INPP4AQ96PE3 977 aaPredicted RBP22■■□□□ 1.11
CIRBP-217ENST00000588230 SEZ6LQ9BYH1 1024 aa22■■□□□ 1.11
CIRBP-217ENST00000588230 SLKQ9H2G2 1235 aaPredicted RBP22■■□□□ 1.11
CIRBP-217ENST00000588230 TIMP1P01033 207 aa21.99■■□□□ 1.11
CIRBP-217ENST00000588230 AK2P54819 239 aa21.99■■□□□ 1.11
CIRBP-217ENST00000588230 NLRX1Q86UT6 975 aa21.99■■□□□ 1.11
CIRBP-217ENST00000588230 EMID1Q96A84 441 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-217ENST00000588230 C6orf50Q9HD87 102 aa21.99■■□□□ 1.11
CIRBP-217ENST00000588230 TPCN1Q9ULQ1 816 aa21.99■■□□□ 1.11
CIRBP-217ENST00000588230 MYH7BA7E2Y1 1941 aa21.98■■□□□ 1.11
CIRBP-217ENST00000588230 SPATA31C2B4DYI2 1134 aa21.98■■□□□ 1.11
CIRBP-217ENST00000588230 TLR3O15455 904 aaKnown RBP21.98■■□□□ 1.11
CIRBP-217ENST00000588230 FIBPO43427 364 aa21.98■■□□□ 1.11
CIRBP-217ENST00000588230 GGPS1O95749 300 aa21.98■■□□□ 1.11
CIRBP-217ENST00000588230 MMP3P08254 477 aa21.98■■□□□ 1.11
CIRBP-217ENST00000588230 UBA1P22314 1058 aaKnown RBP21.98■■□□□ 1.11
CIRBP-217ENST00000588230 ICAM3P32942 547 aa21.98■■□□□ 1.11
CIRBP-217ENST00000588230 CELF3Q5SZQ8 465 aaKnown RBP21.98■■□□□ 1.11
CIRBP-217ENST00000588230 MLXIPQ9HAP2 919 aa21.98■■□□□ 1.11
CIRBP-217ENST00000588230 ESYT2A0FGR8 921 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 SORBS3O60504 671 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 SP2Q02086 613 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 AP3B2Q13367 1082 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 DGKDQ16760 1214 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 MYSM1Q5VVJ2 828 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 CCDC148Q8NFR7 591 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 PPTC7Q8NI37 304 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 SPATA33Q96N06 139 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 ANO3Q9BYT9 981 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 ZMYND12Q9H0C1 365 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 TRPV6Q9H1D0 765 aa21.97■■□□□ 1.11
CIRBP-217ENST00000588230 CDH23Q9H251 3354 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 B4GALT4O60513 344 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 PFKFB2O60825 505 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 CDKL5O76039 1030 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 GNA11P29992 359 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 FPGSQ05932 587 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 SCRN1Q12765 414 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 NEDD9Q14511 834 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 JAKMIP3Q5VZ66 844 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 MFSD5Q6N075 450 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 PGBD1Q96JS3 809 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 TMEM260Q9NX78 707 aa21.96■■□□□ 1.11
CIRBP-217ENST00000588230 DEXIO95424 95 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 CHMP4BP1P59074 171 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 FAM47CQ5HY64 1035 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 MCTP2Q6DN12 878 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 C16orf59Q7L2K0 433 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 GPRASP2Q96D09 838 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 CDHR1Q96JP9 859 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 VPS54Q9P1Q0 977 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 UMODL1Q5DID0 1318 aa21.95■■□□□ 1.1
CIRBP-217ENST00000588230 PPFIA4O75335 1185 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 ITGB5P18084 799 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 CLK2P49760 499 aaKnown RBP21.94■■□□□ 1.1
CIRBP-217ENST00000588230 SEMA3FQ13275 785 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 NBPF20Q3BBV1 942 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 Q7L0L9 218 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 REXO1Q8N1G1 1221 aaKnown RBP21.94■■□□□ 1.1
CIRBP-217ENST00000588230 BICD2Q8TD16 824 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 C22orf23Q9BZE7 217 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 PPP1R12CQ9BZL4 782 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 SH3GLB2Q9NR46 395 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 UBIAD1Q9Y5Z9 338 aa21.94■■□□□ 1.1
CIRBP-217ENST00000588230 NLRP5P59047 1200 aa21.93■■□□□ 1.1
CIRBP-217ENST00000588230 HSDL1Q3SXM5 330 aa21.93■■□□□ 1.1
CIRBP-217ENST00000588230 CYFIP1Q7L576 1253 aa21.93■■□□□ 1.1
CIRBP-217ENST00000588230 GIMAP8Q8ND71 665 aaPredicted RBP21.93■■□□□ 1.1
CIRBP-217ENST00000588230 PPP1R13LQ8WUF5 828 aa21.93■■□□□ 1.1
CIRBP-217ENST00000588230 SENP7Q9BQF6 1050 aa21.93■■□□□ 1.1
CIRBP-217ENST00000588230 NOC4LQ9BVI4 516 aaKnown RBP21.93■■□□□ 1.1
CIRBP-217ENST00000588230 JADE2Q9NQC1 790 aa21.93■■□□□ 1.1
CIRBP-217ENST00000588230 TRMT13Q9NUP7 481 aaKnown RBP21.93■■□□□ 1.1
CIRBP-217ENST00000588230 NOP56O00567 594 aaKnown RBP21.92■■□□□ 1.1
CIRBP-217ENST00000588230 MAFGO15525 162 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms