RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 SENP6Q9GZR1 1112 aaPredicted RBP16.13■□□□□ 0.17
MKS1-213ENST00000585134 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
MKS1-213ENST00000585134 SMC3Q9UQE7 1217 aa16.13■□□□□ 0.17
MKS1-213ENST00000585134 K7ELQ4 463 aaPredicted RBP16.12■□□□□ 0.17
MKS1-213ENST00000585134 MMP1P03956 469 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 MYL3P08590 195 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 CAPN2P17655 700 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 ATN1P54259 1190 aaPredicted RBP16.12■□□□□ 0.17
MKS1-213ENST00000585134 SP4Q02446 784 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 NR5A1Q13285 461 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 MTMR1Q13613 665 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 NONOQ15233 471 aaKnown RBP eCLIP16.12■□□□□ 0.17
MKS1-213ENST00000585134 KCNA10Q16322 511 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 DIS3L2Q8IYB7 885 aaKnown RBP16.12■□□□□ 0.17
MKS1-213ENST00000585134 KLHDC9Q8NEP7 349 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 CYP2W1Q8TAV3 490 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 TBCKQ8TEA7 893 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 GPRASP2Q96D09 838 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 MXRA8Q9BRK3 442 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 JADE2Q9NQC1 790 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 KIF3AQ9Y496 699 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.12■□□□□ 0.17
MKS1-213ENST00000585134 DOCK5Q9H7D0 1870 aa16.12■□□□□ 0.17
MKS1-213ENST00000585134 FAM205CA6NFA0 338 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 M0R2N6 131 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 CTAGE5O15320 804 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 ZEB2O60315 1214 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 ASGR1P07306 291 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 CST5P28325 142 aaPredicted RBP16.11■□□□□ 0.17
MKS1-213ENST00000585134 ICAM3P32942 547 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 CPT1AP50416 773 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 ACLYP53396 1101 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 SP2Q02086 613 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 SAFBQ15424 915 aaKnown RBP eCLIP16.11■□□□□ 0.17
MKS1-213ENST00000585134 INF2Q27J81 1249 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 PLA2G4DQ86XP0 818 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 AFG1LQ8WV93 481 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 SPATA33Q96N06 139 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 PHF24Q9UPV7 400 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 Q9Y3F1 56 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 BRCA2P51587 3418 aa16.11■□□□□ 0.17
MKS1-213ENST00000585134 A0A1W2PQ45 241 aaPredicted RBP16.1■□□□□ 0.17
MKS1-213ENST00000585134 A0A1W2PQY0 241 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 SPATA31C2B4DYI2 1134 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 FAM86B1E9PN63 330 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 TDP2O95551 362 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 MMP3P08254 477 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 FAM86B2P0C5J1 330 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 ARP10275 920 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 CUL4AQ13619 759 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 GNL2Q13823 731 aaKnown RBP16.1■□□□□ 0.17
MKS1-213ENST00000585134 CEP55Q53EZ4 464 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 BRDTQ58F21 947 aaPredicted RBP16.1■□□□□ 0.17
MKS1-213ENST00000585134 CELF3Q5SZQ8 465 aaKnown RBP16.1■□□□□ 0.17
MKS1-213ENST00000585134 CXCL17Q6UXB2 119 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 PCSK9Q8NBP7 692 aaKnown RBP16.1■□□□□ 0.17
MKS1-213ENST00000585134 VTI1AQ96AJ9 217 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 BCAS3Q9H6U6 928 aa16.1■□□□□ 0.17
MKS1-213ENST00000585134 MOXD2PA6NHM9 499 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 DDX39AO00148 427 aaKnown RBP16.09■□□□□ 0.17
MKS1-213ENST00000585134 CYP3A4P08684 503 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 COL6A1P12109 1028 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 KCNA2P16389 499 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 CHMP4BP1P59074 171 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 LETM2Q2VYF4 491 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 PRR16Q569H4 304 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 EARS2Q5JPH6 523 aaKnown RBP16.09■□□□□ 0.17
MKS1-213ENST00000585134 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 SNX21Q969T3 373 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 CDHR1Q96JP9 859 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
MKS1-213ENST00000585134 HTATIP2Q9BUP3 242 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 STARD7Q9NQZ5 370 aa16.09■□□□□ 0.17
MKS1-213ENST00000585134 NOP56O00567 594 aaKnown RBP16.08■□□□□ 0.16
MKS1-213ENST00000585134 ATP9AO75110 1047 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 ZNF286BP0CG31 522 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 TGFB3P10600 412 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 RGS19P49795 217 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 SETQ01105 290 aaPredicted RBP16.08■□□□□ 0.16
MKS1-213ENST00000585134 MLLT1Q03111 559 aaPredicted RBP16.08■□□□□ 0.16
MKS1-213ENST00000585134 LAMC2Q13753 1193 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 NEDD9Q14511 834 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.16
MKS1-213ENST00000585134 NEK8Q86SG6 692 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 PPP1R13LQ8WUF5 828 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 GLT1D1Q96MS3 346 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 SDF4Q9BRK5 362 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 AGO4Q9HCK5 861 aaKnown RBP16.08■□□□□ 0.16
MKS1-213ENST00000585134 KCNH7Q9NS40 1196 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 POLR3EQ9NVU0 708 aa16.08■□□□□ 0.16
MKS1-213ENST00000585134 ALPK3Q96L96 1907 aa16.07■□□□□ 0.16
MKS1-213ENST00000585134 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
MKS1-213ENST00000585134 H3BQV1 296 aa16.07■□□□□ 0.16
MKS1-213ENST00000585134 MEIS1O00470 390 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms