RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 F2P00734 622 aa21.25■□□□□ 0.99
TOP3A-220ENST00000585031 SNHG28P0DPA3 235 aa21.25■□□□□ 0.99
TOP3A-220ENST00000585031 DLX2Q07687 328 aaPredicted RBP21.25■□□□□ 0.99
TOP3A-220ENST00000585031 SMAD2Q15796 467 aaKnown RBP21.25■□□□□ 0.99
TOP3A-220ENST00000585031 EP400NLQ6ZTU2 488 aa21.25■□□□□ 0.99
TOP3A-220ENST00000585031 SYTL5Q8TDW5 730 aaPredicted RBP21.25■□□□□ 0.99
TOP3A-220ENST00000585031 GPATCH3Q96I76 525 aa21.25■□□□□ 0.99
TOP3A-220ENST00000585031 MPHOSPH6Q99547 160 aaKnown RBP21.25■□□□□ 0.99
TOP3A-220ENST00000585031 FSD1Q9BTV5 496 aa21.25■□□□□ 0.99
TOP3A-220ENST00000585031 GOLGA8HP0CJ92 632 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 PTPN5P54829 565 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 CTC1Q2NKJ3 1217 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 PLEKHG4Q58EX7 1191 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 RRP12Q5JTH9 1297 aaKnown RBP21.24■□□□□ 0.99
TOP3A-220ENST00000585031 TMEM192Q8IY95 271 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 EDAQ92838 391 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 UBA5Q9GZZ9 404 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 TCP11L1Q9NUJ3 509 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 MUTYHQ9UIF7 546 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 ZDBF2Q9HCK1 2354 aa21.24■□□□□ 0.99
TOP3A-220ENST00000585031 ZFHX2Q9C0A1 2572 aaPredicted RBP21.24■□□□□ 0.99
TOP3A-220ENST00000585031 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.23■□□□□ 0.99
TOP3A-220ENST00000585031 NCK2O43639 380 aa21.23■□□□□ 0.99
TOP3A-220ENST00000585031 AMHP03971 560 aa21.23■□□□□ 0.99
TOP3A-220ENST00000585031 CLUL1Q15846 466 aa21.23■□□□□ 0.99
TOP3A-220ENST00000585031 EMID1Q96A84 441 aaPredicted RBP21.23■□□□□ 0.99
TOP3A-220ENST00000585031 NSUN3Q9H649 340 aaKnown RBP21.23■□□□□ 0.99
TOP3A-220ENST00000585031 CLDND1Q9NY35 253 aa21.23■□□□□ 0.99
TOP3A-220ENST00000585031 COL4A6Q14031 1691 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 CACNA1HO95180 2353 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 SORBS3O60504 671 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 UPP2O95045 317 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 HOXD8P13378 290 aaPredicted RBP21.22■□□□□ 0.99
TOP3A-220ENST00000585031 FOXK2Q01167 660 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 TCF15Q12870 199 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 RPAINQ86UA6 219 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 RNF135Q8IUD6 432 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 TOP1MTQ969P6 601 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 PRRX2Q99811 253 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 TOMM22Q9NS69 142 aa21.22■□□□□ 0.99
TOP3A-220ENST00000585031 PTPRZ1P23471 2315 aaPredicted RBP21.21■□□□□ 0.99
TOP3A-220ENST00000585031 RSPH10B2B2RC85 870 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 B4DLN1 442 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 RGS20O76081 388 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 LINC00271P0C7V0 271 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 RSPH10BP0C881 870 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 THPOP40225 353 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 MRPL12P52815 198 aaKnown RBP21.21■□□□□ 0.99
TOP3A-220ENST00000585031 STXBP2Q15833 593 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 PKN1Q16512 942 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 SERINC5Q86VE9 423 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 FBXO11Q86XK2 927 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 PPTC7Q8NI37 304 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 NSUN6Q8TEA1 469 aaKnown RBP21.21■□□□□ 0.99
TOP3A-220ENST00000585031 RMDN3Q96TC7 470 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 GTF3C3Q9Y5Q9 886 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 DMDP11532 3685 aa21.21■□□□□ 0.99
TOP3A-220ENST00000585031 FGAP02671 866 aa21.2■□□□□ 0.98
TOP3A-220ENST00000585031 EIF2AK2P19525 551 aaKnown RBP21.2■□□□□ 0.98
TOP3A-220ENST00000585031 GTF2F1P35269 517 aaKnown RBP eCLIP21.2■□□□□ 0.98
TOP3A-220ENST00000585031 HYAL1Q12794 435 aa21.2■□□□□ 0.98
TOP3A-220ENST00000585031 ALX1Q15699 326 aa21.2■□□□□ 0.98
TOP3A-220ENST00000585031 POP1Q99575 1024 aaKnown RBP21.2■□□□□ 0.98
TOP3A-220ENST00000585031 ALG13Q9NP73 1137 aaKnown RBP21.2■□□□□ 0.98
TOP3A-220ENST00000585031 PNMA2Q9UL42 364 aa21.2■□□□□ 0.98
TOP3A-220ENST00000585031 TTC41PQ6P2S7 1318 aa21.2■□□□□ 0.98
TOP3A-220ENST00000585031 SPTBN4Q9H254 2564 aa21.2■□□□□ 0.98
TOP3A-220ENST00000585031 MBTPS2O43462 519 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 SP2Q02086 613 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 HSDL1Q3SXM5 330 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 MYSM1Q5VVJ2 828 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 IWS1Q96ST2 819 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 YME1L1Q96TA2 773 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 C16orf70Q9BSU1 422 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 KATNAL1Q9BW62 490 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 BCAS3Q9H6U6 928 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 EMSYQ7Z589 1322 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 KMT2EQ8IZD2 1858 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 DOCK5Q9H7D0 1870 aa21.19■□□□□ 0.98
TOP3A-220ENST00000585031 GRM6O15303 877 aa21.18■□□□□ 0.98
TOP3A-220ENST00000585031 LAMC2Q13753 1193 aa21.18■□□□□ 0.98
TOP3A-220ENST00000585031 CDC37Q16543 378 aaPredicted RBP21.18■□□□□ 0.98
TOP3A-220ENST00000585031 TRIM67Q6ZTA4 783 aa21.18■□□□□ 0.98
TOP3A-220ENST00000585031 DHX37Q8IY37 1157 aaKnown RBP21.18■□□□□ 0.98
TOP3A-220ENST00000585031 PBXIP1Q96AQ6 731 aa21.18■□□□□ 0.98
TOP3A-220ENST00000585031 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
TOP3A-220ENST00000585031 MRVI1Q9Y6F6 885 aa21.18■□□□□ 0.98
TOP3A-220ENST00000585031 OPLAHO14841 1288 aa21.17■□□□□ 0.98
TOP3A-220ENST00000585031 LINC01565O15544 149 aa21.17■□□□□ 0.98
TOP3A-220ENST00000585031 TBX10O75333 385 aa21.17■□□□□ 0.98
TOP3A-220ENST00000585031 NR3C2P08235 984 aa21.17■□□□□ 0.98
TOP3A-220ENST00000585031 HOXC8P31273 242 aa21.17■□□□□ 0.98
TOP3A-220ENST00000585031 HAND2P61296 217 aa21.17■□□□□ 0.98
TOP3A-220ENST00000585031 GPKOWQ92917 476 aaPredicted RBP eCLIP21.17■□□□□ 0.98
TOP3A-220ENST00000585031 ZKSCAN3Q9BRR0 538 aa21.17■□□□□ 0.98
TOP3A-220ENST00000585031 PXMP2Q9NR77 195 aa21.17■□□□□ 0.98
TOP3A-220ENST00000585031 ABCB11O95342 1321 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 TMEM221A6NGB7 291 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 M0R296 226 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 TREHO43280 583 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms