RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ARMCX3Q9UH62 379 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-217ENST00000584582 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 LRRC53A6NM62 1247 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 NCK2O43639 380 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 OAS2P29728 719 aaKnown RBP12.48□□□□□ -0.41
TOP3A-217ENST00000584582 GFPT1Q06210 699 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-217ENST00000584582 KLHL7Q8IXQ5 586 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 ZNF341Q9BYN7 854 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 TRIM31Q9BZY9 425 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
TOP3A-217ENST00000584582 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 BCCIPQ9P287 314 aaKnown RBP eCLIP12.48□□□□□ -0.41
TOP3A-217ENST00000584582 PACSIN2Q9UNF0 486 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-217ENST00000584582 EXOC3O60645 756 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 FKBP3Q00688 224 aaKnown RBP12.48□□□□□ -0.41
TOP3A-217ENST00000584582 TMEM179Q6ZVK1 233 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 BICD1Q96G01 975 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
TOP3A-217ENST00000584582 GCOM1H8Y6P7 765 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-217ENST00000584582 CTIFO43310 598 aaKnown RBP12.47□□□□□ -0.41
TOP3A-217ENST00000584582 POLR2MP0CAP2 368 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 C2orf54Q08AI8 447 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 KIAA0753Q2KHM9 967 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 SLC9C1Q4G0N8 1177 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 UNC13DQ70J99 1090 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 BANK1Q8NDB2 785 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 BACH1O14867 736 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 ZBTB39O15060 712 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 LRRN2O75325 713 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 SMC1AQ14683 1233 aaKnown RBP12.47□□□□□ -0.41
TOP3A-217ENST00000584582 VWA3BQ502W6 1294 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 ODR4Q5SWX8 454 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 SFMBT2Q5VUG0 894 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 TRIM65Q6PJ69 517 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 DHX37Q8IY37 1157 aaKnown RBP12.47□□□□□ -0.41
TOP3A-217ENST00000584582 PROM2Q8N271 834 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 GIMAP8Q8ND71 665 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-217ENST00000584582 CCDC51Q96ER9 411 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 RSPH10B2B2RC85 870 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 RHOBTB3O94955 611 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 TUBB4AP04350 444 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 RSPH10BP0C881 870 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 PNMA6AP0CW24 399 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-217ENST00000584582 ACTN1P12814 892 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 PSMC6P62333 389 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 EHHADHQ08426 723 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 SF3A3Q12874 501 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■■■□ 21.4
TOP3A-217ENST00000584582 NAA35Q5VZE5 725 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 PROCA1Q8NCQ7 364 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-217ENST00000584582 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 GOLPH3Q9H4A6 298 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 THAP9Q9H5L6 903 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 PDE11AQ9HCR9 933 aa12.47□□□□□ -0.41
TOP3A-217ENST00000584582 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.41
TOP3A-217ENST00000584582 ATP1A1P05023 1023 aaKnown RBP12.46□□□□□ -0.41
TOP3A-217ENST00000584582 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.41
TOP3A-217ENST00000584582 FAM178BQ8IXR5 827 aa12.46□□□□□ -0.41
TOP3A-217ENST00000584582 EHBP1Q8NDI1 1231 aa12.46□□□□□ -0.41
TOP3A-217ENST00000584582 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
TOP3A-217ENST00000584582 NUP58Q9BVL2 599 aa12.46□□□□□ -0.41
TOP3A-217ENST00000584582 EHD2Q9NZN4 543 aa12.46□□□□□ -0.41
TOP3A-217ENST00000584582 LIMA1Q9UHB6 759 aaKnown RBP12.46□□□□□ -0.41
TOP3A-217ENST00000584582 UTRNP46939 3433 aa12.46□□□□□ -0.41
TOP3A-217ENST00000584582 FAM237AA0A1B0GTK4 181 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 EPB41P11171 864 aaKnown RBP12.46□□□□□ -0.42
TOP3A-217ENST00000584582 ZBED6P86452 979 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 MAN2A1Q16706 1144 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 CDKAL1Q5VV42 579 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 SH3RF1Q7Z6J0 888 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 VPS36Q86VN1 386 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 GPR161Q8N6U8 529 aaKnown RBP12.46□□□□□ -0.42
TOP3A-217ENST00000584582 KIAA0895Q8NCT3 520 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 ANKRD7Q92527 254 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 ZNF577Q9BSK1 485 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 SEMA6BQ9H3T3 888 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 HAUS4Q9H6D7 363 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 RIC8AQ9NPQ8 531 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 KBTBD4Q9NVX7 518 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 STK17AQ9UEE5 414 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 COL4A3BPQ9Y5P4 624 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 MYH14Q7Z406 1995 aaKnown RBP12.46□□□□□ -0.42
TOP3A-217ENST00000584582 ABCB11O95342 1321 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 KIF11P52732 1056 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 ASIC2Q16515 512 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 LONRF2Q1L5Z9 754 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 NT5DC1Q5TFE4 455 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 GTPBP4Q9BZE4 634 aaKnown RBP12.46□□□□□ -0.42
TOP3A-217ENST00000584582 LACRTQ9GZZ8 138 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 CUEDC2Q9H467 287 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 GOPCQ9HD26 462 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 HYOU1Q9Y4L1 999 aa12.46□□□□□ -0.42
TOP3A-217ENST00000584582 MYO5AQ9Y4I1 1855 aaKnown RBP12.45□□□□□ -0.42
TOP3A-217ENST00000584582 PSMD14O00487 310 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 TADA3O75528 432 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 FLAD1Q8NFF5 587 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms